Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 Y_RNA.573-201ENST00000384763 105 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 RNU6-193P-201ENST00000410977 107 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 OR9R1P-201ENST00000412200 877 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 MTND1P23-201ENST00000416931 372 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 AL669831.1-202ENST00000428504 417 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.12□□□□□ -1.91
SIN3AQ96ST3 GTF2IP13-201ENST00000438487 386 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 NFU1P2-201ENST00000448700 469 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 SNRPFP3-201ENST00000457792 225 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 TRBV12-1-201ENST00000479785 344 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 AC087190.1-201ENST00000484462 480 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 RNA5SP200-201ENST00000516360 103 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 SCARNA16.3-201ENST00000516595 184 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 SNORD59.2-201ENST00000516873 68 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 AC009902.1-201ENST00000519351 183 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.12□□□□□ -1.91
SIN3AQ96ST3 AL157871.3-201ENST00000557231 293 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 MTCO3P24-201ENST00000572729 782 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SIN3AQ96ST3 MIR4435-1-201ENST00000582552 80 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 MIR4801-201ENST00000582704 82 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 AC002553.4-201ENST00000616896 331 ntBASIC3.12□□□□□ -1.91
SIN3AQ96ST3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.12□□□□□ -1.91
SIN3AQ96ST3 AC022336.2-201ENST00000568966 2538 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 MIR514A2-201ENST00000385131 88 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 MIR514A3-201ENST00000385132 88 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 MIR301A-201ENST00000385261 86 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 SNRPEP10-201ENST00000420249 274 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 AC099548.1-201ENST00000421443 426 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 Z98742.2-201ENST00000431564 187 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.11□□□□□ -1.91
SIN3AQ96ST3 AL360271.2-201ENST00000447710 161 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.11□□□□□ -1.91
SIN3AQ96ST3 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.11□□□□□ -1.91
SIN3AQ96ST3 RPS15AP34-201ENST00000487776 387 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 AC022493.1-201ENST00000492984 337 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 CCDC34P1-201ENST00000507441 517 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 RNU6-143P-201ENST00000516942 93 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 AL137161.1-201ENST00000532231 390 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.11□□□□□ -1.91
SIN3AQ96ST3 MIR1273C-201ENST00000578669 77 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.11□□□□□ -1.91
SIN3AQ96ST3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.11□□□□□ -1.91
SIN3AQ96ST3 RBM11P1-201ENST00000604951 799 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 AL138880.2-201ENST00000616214 239 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.11□□□□□ -1.91
SIN3AQ96ST3 U2.21-201ENST00000637295 81 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 AC024614.3-201ENST00000637860 256 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 AC005336.3-201ENST00000623833 2679 ntBASIC3.11□□□□□ -1.91
SIN3AQ96ST3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.11□□□□□ -1.91
SIN3AQ96ST3 RNU6-715P-201ENST00000365204 103 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 RNU6-38P-201ENST00000384085 107 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 MIR578-201ENST00000384828 96 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 AL079342.1-201ENST00000401460 267 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 AL606923.1-201ENST00000406616 190 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 RNU2-2P-201ENST00000410396 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 RNU2-68P-201ENST00000410878 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 AL139156.1-201ENST00000412785 841 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 USP9YP6-201ENST00000413550 854 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.1□□□□□ -1.91
SIN3AQ96ST3 RPS15AP27-201ENST00000449183 343 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 AC010099.1-201ENST00000455434 375 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 SCARNA18-201ENST00000459004 134 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 RNU6-333P-201ENST00000459117 107 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.1□□□□□ -1.91
SIN3AQ96ST3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.1□□□□□ -1.91
SIN3AQ96ST3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.1□□□□□ -1.91
SIN3AQ96ST3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.1□□□□□ -1.91
SIN3AQ96ST3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.1□□□□□ -1.91
SIN3AQ96ST3 SNORD60.2-201ENST00000516883 86 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.1□□□□□ -1.91
SIN3AQ96ST3 AP000867.2-201ENST00000532468 320 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 AC068135.2-201ENST00000569293 1028 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 AC010525.2-201ENST00000590920 195 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 U2.15-201ENST00000611544 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 DISC2.1-201ENST00000612827 205 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 DUSP12P1-201ENST00000612874 516 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 U2.16-201ENST00000613119 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 U2.12-201ENST00000613778 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 U2.20-201ENST00000613956 192 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 U2.9-201ENST00000615427 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 U2.11-201ENST00000616345 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 U2.2-201ENST00000616535 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 U2.3-201ENST00000617785 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 U2.19-201ENST00000618602 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 RNU2-1-201ENST00000618664 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 U2.6-201ENST00000619225 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 AC010378.1-201ENST00000619270 362 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 U2.5-201ENST00000619465 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 U2.10-201ENST00000620268 191 ntBASIC3.1□□□□□ -1.91
SIN3AQ96ST3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SIN3AQ96ST3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
SIN3AQ96ST3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SIN3AQ96ST3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SIN3AQ96ST3 OR4G1P-203ENST00000641984 1631 ntBASIC3.09□□□□□ -1.91
SIN3AQ96ST3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.09□□□□□ -1.91
SIN3AQ96ST3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.09□□□□□ -1.91
SIN3AQ96ST3 RNU6-877P-201ENST00000383868 107 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms