Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC234778.2-201ENST00000566241 354 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 MIR3682-201ENST00000581338 84 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC00477Q96M19 BNIP3P22-201ENST00000593399 556 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AL109918.3-201ENST00000603072 338 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AL096840.1-201ENST00000603287 93 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC073648.5-201ENST00000603502 305 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AL670379.4-201ENST00000605279 254 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC107294.1-201ENST00000609524 467 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC009161.2-201ENST00000624626 138 ntBASIC1.7□□□□□ -2.14
LINC00477Q96M19 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC00477Q96M19 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC00477Q96M19 AC110491.1-201ENST00000562191 2010 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 CENPCP1-201ENST00000533085 2578 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC007336.1-201ENST00000576365 3828 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 AL354685.2-201ENST00000448218 1447 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LINC00477Q96M19 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LINC00477Q96M19 RNA5SP37-201ENST00000365420 130 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 Y_RNA.372-201ENST00000365599 102 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 RNU6-259P-201ENST00000383999 107 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 Y_RNA.517-201ENST00000384551 106 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 MIR454-201ENST00000390180 115 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 SNORA48.3-201ENST00000391081 134 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 RPS4XP8-201ENST00000402039 771 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 AL133475.1-201ENST00000404414 305 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 CIR1P3-201ENST00000405137 479 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 GSTA9P-201ENST00000406231 611 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 CYCSP33-201ENST00000414485 327 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 MTATP6P18-201ENST00000417994 673 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC137499.1-201ENST00000427602 88 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 SRIP2-201ENST00000428470 166 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 MTCO2P7-201ENST00000446518 666 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 HMGN2P10-201ENST00000448085 265 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 FDX1P2-201ENST00000450769 375 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LINC00477Q96M19 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC011005.2-201ENST00000487324 359 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 RPL9P6-201ENST00000492764 598 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 RN7SL636P-201ENST00000497504 294 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 CCDC34P1-201ENST00000507441 517 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 RNU6-410P-201ENST00000517006 107 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 SCARNA3-201ENST00000517097 143 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC021739.1-201ENST00000559631 174 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 BNIP3P30-201ENST00000601184 574 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 NDUFA8P1-201ENST00000605525 367 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC046143.2-201ENST00000609789 160 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC104073.3-201ENST00000610942 955 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 U4atac.1-201ENST00000618345 95 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 U6.99-201ENST00000637524 83 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 AL359851.1-201ENST00000569460 4997 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 AC131280.1-202ENST00000624067 4211 ntBASIC1.69□□□□□ -2.14
LINC00477Q96M19 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC00477Q96M19 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC008555.8-201ENST00000623602 2168 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LINC00477Q96M19 RNU6-179P-201ENST00000363350 107 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 RNY1P12-201ENST00000364251 105 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 SNORA16B-201ENST00000364674 135 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LINC00477Q96M19 RNU6-1103P-201ENST00000384150 107 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 SNORA67.4-201ENST00000384688 142 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 RNU2-3P-201ENST00000410144 191 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 RNU2-8P-201ENST00000410727 190 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 RPL21P90-201ENST00000415692 466 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC003685.2-201ENST00000422795 395 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 MTCYBP5-201ENST00000423752 1135 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 AL606489.2-201ENST00000433886 234 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 RPS3P1-201ENST00000456781 192 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 RNU6-953P-201ENST00000459154 107 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 DYNLL1P5-201ENST00000467158 270 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC055731.1-201ENST00000474387 401 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 TRBV1-201ENST00000476502 284 ntBASIC1.68□□□□□ -2.14
LINC00477Q96M19 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.68□□□□□ -2.14
LINC00477Q96M19 SNORA25.11-201ENST00000515935 105 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms