Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC245102.2-201ENST00000448956 180 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC092757.1-201ENST00000467293 467 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC147055.4-201ENST00000504399 745 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC136619.2-201ENST00000563361 631 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC105224.1-201ENST00000587055 421 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC010738.1-201ENST00000604970 987 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 AL589743.7-201ENST00000612637 233 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC011155.2-201ENST00000623202 216 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC106858.1-201ENST00000637497 429 ntBASIC0.05□□□□□ -2.4
SPG11Q96JI7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.05□□□□□ -2.4
SPG11Q96JI7 AC090625.1-201ENST00000357130 210 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 RNU4-12P-201ENST00000365233 139 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 RNU6-945P-201ENST00000383947 107 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 RNU6-968P-201ENST00000384076 107 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 MIR19B1-201ENST00000384829 87 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 RNU6-910P-201ENST00000390844 107 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 PNRC2P1-201ENST00000423940 420 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.04□□□□□ -2.4
SPG11Q96JI7 AC024082.2-201ENST00000434771 238 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 RPL26P26-201ENST00000480251 434 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.04□□□□□ -2.4
SPG11Q96JI7 COX7A2P2-201ENST00000505291 250 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 MTCYBP16-201ENST00000509187 1129 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.04□□□□□ -2.4
SPG11Q96JI7 ACA64.5-201ENST00000516207 127 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 AC005832.3-201ENST00000537929 631 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 MTCYBP27-201ENST00000555160 670 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.04□□□□□ -2.4
SPG11Q96JI7 AC040896.1-201ENST00000613819 479 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 AC009233.1-201ENST00000616477 371 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 AC091965.5-201ENST00000624785 342 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 AC092192.1-201ENST00000633154 1018 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
SPG11Q96JI7 MIR424-201ENST00000362227 98 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
SPG11Q96JI7 RNU6-152P-201ENST00000384037 107 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 MIR29C-201ENST00000385231 88 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 MIR1267-201ENST00000408723 78 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.04□□□□□ -2.4
SPG11Q96JI7 AC104651.1-201ENST00000427559 735 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.04□□□□□ -2.4
SPG11Q96JI7 TRBVA-201ENST00000498804 316 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.04□□□□□ -2.4
SPG11Q96JI7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.04□□□□□ -2.4
SPG11Q96JI7 MIR3681-201ENST00000580089 72 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.04□□□□□ -2.4
SPG11Q96JI7 AC098614.4-201ENST00000607601 462 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 AC023934.1-201ENST00000574529 2389 ntBASIC0.04□□□□□ -2.4
SPG11Q96JI7 MTND4P16-201ENST00000466108 1367 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 U3.9-201ENST00000363823 204 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 RNU6-272P-201ENST00000411028 104 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.03□□□□□ -2.4
SPG11Q96JI7 USP9YP26-201ENST00000421008 661 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 USP9YP18-201ENST00000425912 695 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 AL589872.1-201ENST00000426602 288 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.03□□□□□ -2.4
SPG11Q96JI7 USP9YP24-201ENST00000434374 697 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 USP9YP17-201ENST00000444617 696 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.03□□□□□ -2.4
SPG11Q96JI7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.03□□□□□ -2.4
SPG11Q96JI7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.03□□□□□ -2.4
SPG11Q96JI7 RAP1BP2-201ENST00000478270 544 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 RNA5SP255-201ENST00000516370 107 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 RNU6-798P-201ENST00000516912 103 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 COPS8P3-201ENST00000526024 482 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
SPG11Q96JI7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.03□□□□□ -2.4
SPG11Q96JI7 AC021739.1-201ENST00000559631 174 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 AC055876.5-201ENST00000605667 259 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 AL590240.4-201ENST00000616908 390 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 AC009509.4-201ENST00000619202 509 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 MTND5P30-201ENST00000452896 1731 ntBASIC0.03□□□□□ -2.4
SPG11Q96JI7 ZNF680P1-201ENST00000436625 1469 ntBASIC0.03□□□□□ -2.41
SPG11Q96JI7 MIR302D-201ENST00000362275 68 ntBASIC0.03□□□□□ -2.41
SPG11Q96JI7 RNU6-160P-201ENST00000384591 107 ntBASIC0.03□□□□□ -2.41
SPG11Q96JI7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.03□□□□□ -2.41
SPG11Q96JI7 AC114482.1-201ENST00000418010 247 ntBASIC0.03□□□□□ -2.41
SPG11Q96JI7 MTND2P19-201ENST00000449129 1012 ntBASIC0.03□□□□□ -2.41
SPG11Q96JI7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.03□□□□□ -2.41
SPG11Q96JI7 MTND2P26-201ENST00000528255 1029 ntBASIC0.03□□□□□ -2.41
SPG11Q96JI7 AC004923.2-201ENST00000529649 369 ntBASIC0.03□□□□□ -2.41
SPG11Q96JI7 AP003034.1-201ENST00000534621 422 ntBASIC0.03□□□□□ -2.41
SPG11Q96JI7 AC008088.1-201ENST00000580993 280 ntBASIC0.03□□□□□ -2.41
SPG11Q96JI7 AL158163.2-201ENST00000619110 700 ntBASIC0.03□□□□□ -2.41
SPG11Q96JI7 AC100810.6-201ENST00000638068 285 ntBASIC0.03□□□□□ -2.41
SPG11Q96JI7 RPS15AP5-201ENST00000436276 388 ntBASIC0.02□□□□□ -2.41
SPG11Q96JI7 FGF7P5-201ENST00000441829 291 ntBASIC0.02□□□□□ -2.41
SPG11Q96JI7 AC108729.1-201ENST00000487812 947 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms