Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS50Q96JG6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.26□□□□□ -1.89
VPS50Q96JG6 RPL39P5-202ENST00000512505 151 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS50Q96JG6 RNU6-1183P-201ENST00000517054 60 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 Y_RNA.718-201ENST00000517110 102 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.26□□□□□ -1.89
VPS50Q96JG6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.26□□□□□ -1.89
VPS50Q96JG6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.26□□□□□ -1.89
VPS50Q96JG6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 MIR6128-201ENST00000615528 109 ntBASIC3.26□□□□□ -1.89
VPS50Q96JG6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
VPS50Q96JG6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.26□□□□□ -1.89
VPS50Q96JG6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
VPS50Q96JG6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VPS50Q96JG6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
VPS50Q96JG6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS50Q96JG6 RNU6-525P-201ENST00000363685 104 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VPS50Q96JG6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS50Q96JG6 RNU6-214P-201ENST00000384130 107 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 RNU6-1297P-201ENST00000384415 104 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 MIR491-201ENST00000384877 84 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS50Q96JG6 BMS1P22-201ENST00000414726 313 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS50Q96JG6 AF228730.4-201ENST00000421457 183 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 AL353729.1-201ENST00000425044 720 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 SNAP23P1-201ENST00000433229 246 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VPS50Q96JG6 AC096745.1-201ENST00000509945 370 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 RNU6-1213P-201ENST00000517075 94 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.25□□□□□ -1.89
VPS50Q96JG6 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS50Q96JG6 AC007536.1-201ENST00000533382 349 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.25□□□□□ -1.89
VPS50Q96JG6 IMMP1LP2-201ENST00000552954 492 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 ANP32BP3-201ENST00000559213 706 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 AC100830.2-201ENST00000581636 240 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 AL645944.1-201ENST00000603857 493 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VPS50Q96JG6 AC084781.2-201ENST00000615568 161 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 U4.6-201ENST00000621618 127 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 Z69720.2-201ENST00000624755 279 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.25□□□□□ -1.89
VPS50Q96JG6 AC091564.4-201ENST00000533934 2194 ntBASIC3.25□□□□□ -1.89
VPS50Q96JG6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS50Q96JG6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS50Q96JG6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS50Q96JG6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS50Q96JG6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
VPS50Q96JG6 RNU4-35P-201ENST00000362588 141 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 RNU1-73P-201ENST00000383971 164 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 RNU6-601P-201ENST00000384540 107 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 RNVU1-14-201ENST00000384770 164 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 Y_RNA.579-201ENST00000390939 94 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 AL445529.1-201ENST00000398713 389 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 MIR887-201ENST00000401258 79 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 AL031121.1-201ENST00000406553 254 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 RN7SKP58-201ENST00000411010 305 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.24□□□□□ -1.89
VPS50Q96JG6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS50Q96JG6 AC026801.1-201ENST00000497178 464 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS50Q96JG6 Y_RNA.687-201ENST00000516558 91 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 RN7SKP282-201ENST00000516824 299 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 HIGD1AP1-201ENST00000550979 275 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS50Q96JG6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS50Q96JG6 AC012468.1-201ENST00000604888 430 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 AL121917.1-203ENST00000605534 577 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS50Q96JG6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.24□□□□□ -1.89
VPS50Q96JG6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.24□□□□□ -1.89
VPS50Q96JG6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS50Q96JG6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS50Q96JG6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VPS50Q96JG6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
VPS50Q96JG6 MTND5P19-201ENST00000424872 1794 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 Y_RNA.138-201ENST00000363462 102 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 Y_RNA.151-201ENST00000363566 112 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 RNA5SP139-201ENST00000364340 117 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 RNU6-898P-201ENST00000365627 104 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 RNU6-1011P-201ENST00000384668 107 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 SNORD56-201ENST00000413522 71 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 AL096701.2-201ENST00000416920 238 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS50Q96JG6 HMGN2P30-201ENST00000423237 256 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS50Q96JG6 AL031183.1-201ENST00000457667 207 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 snoU13.28-201ENST00000459235 104 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 RPL23AP45-201ENST00000476406 468 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 AC025518.1-201ENST00000479856 347 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 RPS27AP10-201ENST00000496103 208 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 AC079140.5-201ENST00000507882 310 ntBASIC3.23□□□□□ -1.89
VPS50Q96JG6 SNORA70.18-201ENST00000516696 98 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 302.5 ms