Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL365400.1-201ENST00000431854 640 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 USP9YP8-201ENST00000441913 500 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 UQCRHP3-201ENST00000451503 251 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 RNU6-329P-201ENST00000459618 107 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AC146507.2-201ENST00000460608 476 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 RN7SKP43-201ENST00000516173 320 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 RNU6-581P-201ENST00000516214 105 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AP000889.2-201ENST00000532684 490 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AC022080.3-201ENST00000544433 482 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 DNAJC8P1-201ENST00000554535 372 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AC020895.1-201ENST00000595362 272 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AL355877.2-201ENST00000603670 358 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AP000787.2-201ENST00000604432 568 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 uc_338.5-201ENST00000611839 155 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AL355073.2-201ENST00000612106 557 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 FAM157A-202ENST00000615155 405 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AC006386.2-201ENST00000624491 75 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 AC012005.1-201ENST00000624575 75 ntBASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CHMP4CQ96CF2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AC004944.1-201ENST00000517807 3059 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AC008669.1-201ENST00000565823 2178 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 Y_RNA.166-201ENST00000363730 102 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 CD24P4-201ENST00000382840 243 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 RNU6-1027P-201ENST00000383998 107 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 RNU6-1106P-201ENST00000390845 107 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AC022028.1-201ENST00000412054 408 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AC245054.2-201ENST00000415639 319 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AL161651.1-201ENST00000440882 223 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AL031274.1-201ENST00000450334 232 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 RNU7-30P-201ENST00000516835 62 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AC026464.5-201ENST00000562497 722 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 MIR3942-201ENST00000585264 109 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AC011890.2-201ENST00000613393 294 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 AC005858.4-201ENST00000623191 700 ntBASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CHMP4CQ96CF2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 MAPK10-322ENST00000641485 4530 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 RNU6-858P-201ENST00000362436 107 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 RNU5E-4P-201ENST00000364931 120 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 RNU1-100P-201ENST00000365255 165 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 SNORA7.4-201ENST00000384249 137 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 RNU6-1009P-201ENST00000390996 107 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 AL365496.1-201ENST00000426885 215 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 RPL7P43-201ENST00000478876 753 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 AC116655.1-201ENST00000508324 901 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 AC109479.2-201ENST00000517842 174 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 SCOCP1-201ENST00000554676 349 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 AC021646.1-201ENST00000605469 484 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CHMP4CQ96CF2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 SAR1AP2-201ENST00000392696 594 ntBASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 NDUFB4P4-201ENST00000404822 243 ntBASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 RN7SKP123-201ENST00000410732 291 ntBASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 AC096649.2-201ENST00000416186 393 ntBASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 AC025750.2-201ENST00000442609 450 ntBASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 AC012308.1-201ENST00000451232 178 ntBASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 RPL23AP45-201ENST00000476406 468 ntBASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 AC091951.2-201ENST00000500762 203 ntBASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 SNORD19.2-201ENST00000516978 73 ntBASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 AC010653.1-201ENST00000571108 881 ntBASIC3.66□□□□□ -1.82
CHMP4CQ96CF2 MIR3672-201ENST00000584290 82 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms