Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNU6-29P-201ENST00000384637 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-9-201ENST00000384776 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-33P-201ENST00000384793 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-1106P-201ENST00000390845 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 MIR548F5-201ENST00000408421 86 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 AC074085.1-201ENST00000413598 418 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 AL096701.2-201ENST00000416920 238 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RPS4XP2-201ENST00000458402 793 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 snoU109.2-201ENST00000459316 135 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RPL23AP67-201ENST00000465341 474 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 SNORD59.2-201ENST00000516873 68 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 AC091544.4-201ENST00000555268 342 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 AC008121.1-201ENST00000603244 268 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-6P-201ENST00000606623 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 AC069234.5-201ENST00000611056 416 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 Z69720.2-201ENST00000624755 279 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 AL359697.1-201ENST00000624879 587 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 SCARNA4-202ENST00000625402 129 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 ZNF519P1-201ENST00000449011 1626 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM43Q96BQ3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
TRIM43Q96BQ3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM43Q96BQ3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
TRIM43Q96BQ3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.4□□□□□ -1.86
TRIM43Q96BQ3 MIR22-201ENST00000362190 85 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 Y_RNA.61-201ENST00000362835 102 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 SNORD67-201ENST00000390833 111 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 RNA5SP252-201ENST00000391131 119 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AL356968.1-201ENST00000416622 474 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AL121890.1-201ENST00000435457 205 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AP002884.2-201ENST00000471647 395 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AC096745.1-201ENST00000509945 370 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 Y_RNA.687-201ENST00000516558 91 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 RNU6-711P-201ENST00000517255 106 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AP005597.4-201ENST00000526762 229 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AC100830.2-201ENST00000581636 240 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 MIR4435-1-201ENST00000582552 80 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 HMGN2P15-201ENST00000585707 270 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AP000787.2-201ENST00000604432 568 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AC123912.5-201ENST00000605470 343 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 AL359314.1-201ENST00000616913 261 ntBASIC3.4□□□□□ -1.87
TRIM43Q96BQ3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 ADAM3A-203ENST00000461344 2157 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AC073544.1-201ENST00000600110 1595 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 RNU6-898P-201ENST00000365627 104 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 RNU6-1329P-201ENST00000365664 107 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 Z98749.2-208ENST00000381646 500 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 Y_RNA.384-201ENST00000383909 102 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 RNU6-72P-201ENST00000384285 79 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 RNU1-101P-201ENST00000391171 127 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AL360182.1-201ENST00000397433 468 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 MIR548K-201ENST00000408406 116 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 U3.37-201ENST00000408528 213 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 RNA5SP31-201ENST00000411144 127 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AC016831.2-201ENST00000417179 352 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 BPY2DP-201ENST00000422208 265 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 UBE2V1P4-201ENST00000425374 344 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AC093151.1-201ENST00000427711 313 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AL031274.1-201ENST00000450334 232 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AC006026.2-201ENST00000457376 180 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 RNU7-23P-201ENST00000459465 62 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AC130509.1-201ENST00000464158 433 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AC113155.1-201ENST00000511141 769 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AC107934.2-201ENST00000518653 310 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AP005639.2-201ENST00000527592 928 ntBASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM43Q96BQ3 AC099778.2-201ENST00000610904 211 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 859.3 ms