Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RN7SKP32-201ENST00000410167 303 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 VN1R36P-201ENST00000414936 291 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 NDUFB4P5-201ENST00000415445 361 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 PDCL2P1-201ENST00000419302 352 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 MTCO2P3-201ENST00000442543 421 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 Y_RNA.702-201ENST00000516843 96 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AC243972.3-201ENST00000539655 198 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 SCOCP1-201ENST00000554676 349 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AC100830.2-201ENST00000581636 240 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 MIR3672-201ENST00000584290 82 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 UBE2V2P2-201ENST00000587677 504 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AC023043.2-201ENST00000589678 1026 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AC024153.1-201ENST00000603103 365 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AC091152.3-201ENST00000604227 325 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AL022345.1-201ENST00000607292 135 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AL355073.2-201ENST00000612106 557 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AL138726.1-201ENST00000614873 333 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AC005858.4-201ENST00000623191 700 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 AL008636.1-201ENST00000625038 1018 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 FAM35CP-201ENST00000554755 2470 ntBASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC33Q8N5R6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 RNU5E-7P-201ENST00000365290 117 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 RNU6-1027P-201ENST00000383998 107 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AL138885.1-201ENST00000405921 675 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 FTH1P15-201ENST00000406984 280 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AL117339.3-201ENST00000418733 162 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC009414.1-201ENST00000427200 443 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC013470.1-201ENST00000453438 462 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC006026.2-201ENST00000457376 180 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC096576.1-201ENST00000489014 359 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC008628.2-201ENST00000502605 298 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 RPL23AP94-201ENST00000512518 302 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 SNORA43.2-201ENST00000516652 128 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC109479.2-201ENST00000517842 174 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC025423.5-201ENST00000550230 219 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 MIR2682-201ENST00000580305 110 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC020895.1-201ENST00000595362 272 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC005261.5-201ENST00000596280 355 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC011890.2-201ENST00000613393 294 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC018692.3-201ENST00000623929 123 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 U4.7-201ENST00000638126 106 ntBASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC33Q8N5R6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 Y_RNA.301-201ENST00000364990 103 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 RNU6-1013P-201ENST00000384180 107 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 Y_RNA.604-201ENST00000410574 102 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 AC236972.1-201ENST00000433225 199 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 USP9YP8-201ENST00000441913 500 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 AC025750.2-201ENST00000442609 450 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 RPL32P28-201ENST00000443577 397 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 MRPL42P6-201ENST00000486397 371 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 MTCYBP40-201ENST00000509390 1135 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 RNU6-1332P-201ENST00000516666 104 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 ACA59.2-201ENST00000517061 156 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 AC005498.1-201ENST00000592125 465 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 AL391813.1-201ENST00000603098 260 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 AC004832.5-201ENST00000608677 401 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 AL157817.1-201ENST00000614264 790 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 AC002064.3-201ENST00000623448 346 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 AP003122.5-201ENST00000527668 3766 ntBASIC3.3□□□□□ -1.88
CCDC33Q8N5R6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC33Q8N5R6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC33Q8N5R6 RNU6-1329P-201ENST00000365664 107 ntBASIC3.29□□□□□ -1.88
CCDC33Q8N5R6 Y_RNA.500-201ENST00000384466 111 ntBASIC3.29□□□□□ -1.88
CCDC33Q8N5R6 SNORD73A-201ENST00000386062 65 ntBASIC3.29□□□□□ -1.88
CCDC33Q8N5R6 RNA5SP354-201ENST00000391247 136 ntBASIC3.29□□□□□ -1.88
CCDC33Q8N5R6 AC093151.1-201ENST00000427711 313 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms