Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 SNORD5.1-201ENST00000458800 75 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 MIR2053-201ENST00000459295 91 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 RPL27AP5-201ENST00000469428 449 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 RPL30P14-201ENST00000482744 348 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 AC097473.1-201ENST00000508142 408 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 RNU6-327P-201ENST00000516270 127 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 Y_RNA.708-201ENST00000516950 96 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 RNA5SP291-201ENST00000517222 105 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 RNU6-711P-201ENST00000517255 106 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 CASP1P1-201ENST00000526345 212 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 SNRPGP18-201ENST00000553000 214 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 HMGB1P14-201ENST00000557424 591 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 AC138627.2-201ENST00000624202 601 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 AC233263.6-201ENST00000631132 1963 ntBASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.7□□□□□ -1.98
C9orf139Q6ZV77 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 AL359693.1-201ENST00000614959 2407 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 SNORA63C-201ENST00000364578 129 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 SNORA22B-201ENST00000383876 138 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 RNU6-890P-201ENST00000384121 107 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 RNU6-166P-201ENST00000384371 107 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 RNU6-738P-201ENST00000384531 106 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 MIR184-201ENST00000384962 84 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 RNU6-1197P-201ENST00000391183 107 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 AL445529.1-201ENST00000398713 389 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 AL357075.1-201ENST00000404107 726 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 Y_RNA.623-201ENST00000411128 95 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 Z99755.1-201ENST00000414048 380 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 PGBD4P6-201ENST00000421501 610 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 AC236972.1-201ENST00000433225 199 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 MTND4P19-201ENST00000446659 478 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 NDUFB1P2-201ENST00000449477 176 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 NIPA2P5-201ENST00000452282 464 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 RPL23AP14-201ENST00000468281 468 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 RN7SL504P-201ENST00000494496 287 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 SMURF2P1-201ENST00000514992 481 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 SNORA31.19-201ENST00000517079 126 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 AC011494.1-201ENST00000596454 237 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 AC019193.3-201ENST00000609144 554 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 AC092608.2-201ENST00000624427 218 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 FAM35BP-202ENST00000497389 3337 ntBASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.69□□□□□ -1.98
C9orf139Q6ZV77 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 AC073073.2-201ENST00000609827 2578 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 AL049641.1-201ENST00000441055 1948 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 Y_RNA.5-201ENST00000362334 102 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-1115P-201ENST00000362490 106 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-37P-201ENST00000362692 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNA5SP374-201ENST00000362939 125 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 Y_RNA.112-201ENST00000363250 102 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 Y_RNA.202-201ENST00000364083 110 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-11P-201ENST00000364234 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-7-201ENST00000364784 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 SNORA33.2-201ENST00000365413 134 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-8-201ENST00000365467 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-25P-201ENST00000383873 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-1-201ENST00000383898 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-1040P-201ENST00000383974 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-48P-201ENST00000384161 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-36P-201ENST00000384172 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-4P-201ENST00000384205 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-5P-201ENST00000384238 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-842P-201ENST00000384269 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-3P-201ENST00000384314 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-16P-201ENST00000384385 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-15P-201ENST00000384534 107 ntBASIC2.68□□□□□ -1.98
C9orf139Q6ZV77 RNU6-2-201ENST00000384627 107 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms