Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RPS3AP37-201ENST00000419176 745 ntBASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 USP9YP26-201ENST00000421008 661 ntBASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 USP9YP17-201ENST00000444617 696 ntBASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 AC145146.1-201ENST00000496370 254 ntBASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 AC074344.1-201ENST00000512823 224 ntBASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 AP003122.4-201ENST00000530980 758 ntBASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 AP003034.1-201ENST00000534621 422 ntBASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 AL365434.2-201ENST00000607979 234 ntBASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CSPG4Q6UVK1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 RPS3AP36-201ENST00000398190 775 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AL591034.2-201ENST00000402839 359 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 RNU6-272P-201ENST00000411028 104 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC108729.1-201ENST00000487812 947 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC099513.1-201ENST00000490423 301 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 PSMC1P5-201ENST00000512850 177 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC125611.1-201ENST00000549563 229 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC027104.1-201ENST00000563702 681 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC100812.1-201ENST00000607622 580 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 Z82243.1-201ENST00000609432 473 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC117490.2-201ENST00000610042 594 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AL365204.3-201ENST00000612448 685 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 GDI2P1-201ENST00000429312 1336 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 RNU6-414P-201ENST00000363705 104 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 RNU6-611P-201ENST00000384276 104 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 MIR1302-8-201ENST00000408342 128 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 RPL26P27-201ENST00000414397 437 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 RPS29P8-201ENST00000445109 171 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC104073.1-201ENST00000451988 151 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 MEMO1P3-201ENST00000459811 302 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 RPS26P55-201ENST00000471178 356 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC112206.3-201ENST00000514578 389 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC022616.2-201ENST00000523185 300 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC004217.3-201ENST00000551552 878 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AL031176.1-201ENST00000604554 466 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AL161729.4-201ENST00000604650 476 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AC007490.1-201ENST00000624321 703 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AL159972.1-201ENST00000625150 448 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 MTND2P41-201ENST00000637599 773 ntBASIC0.21□□□□□ -2.38
CSPG4Q6UVK1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC138393.1-203ENST00000327086 343 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 SNORD18A-201ENST00000363753 72 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 RNU6-1222P-201ENST00000384615 107 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AL590383.1-201ENST00000428602 75 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 PGBD4P5-201ENST00000445958 426 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 MRPS17P3-201ENST00000465453 385 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC233702.2-202ENST00000562547 291 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 BNIP3P23-201ENST00000599655 511 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 MTCYBP22-201ENST00000603788 447 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 RNU6-91P-201ENST00000607774 107 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AP005229.2-201ENST00000609980 697 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 ZNF663P-202ENST00000641770 1131 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 Y_RNA.18-201ENST00000362461 102 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 SNORD115-3-201ENST00000363100 82 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 U3.8-201ENST00000363675 217 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 SNORA51.6-201ENST00000384151 125 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 RNU6-921P-201ENST00000384361 107 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 RNU6-452P-201ENST00000384406 107 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 RNU6-750P-201ENST00000390946 107 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC127391.1-201ENST00000411737 98 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 NDUFS5P4-201ENST00000412983 318 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC097463.2-201ENST00000421074 142 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC007742.1-201ENST00000425789 329 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 ELOCP26-201ENST00000436067 329 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 RPEP5-201ENST00000441137 268 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 RNA5SP57-201ENST00000459463 123 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC022483.1-201ENST00000514020 567 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 SCARNA15.2-201ENST00000516409 127 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC090142.3-201ENST00000519012 385 ntBASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.2□□□□□ -2.38
CSPG4Q6UVK1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms