Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC010409.1-201ENST00000487382 476 ntBASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 AC079140.2-201ENST00000506193 142 ntBASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 RNU6-322P-201ENST00000516010 103 ntBASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 AP003484.1-201ENST00000530974 250 ntBASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 LINC00557-201ENST00000563184 1279 ntBASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 AC090615.1-201ENST00000577519 154 ntBASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 MIR4661-201ENST00000582720 75 ntBASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 AL139344.1-201ENST00000605228 195 ntBASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 RNU6-91P-201ENST00000607774 107 ntBASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 AC034229.4-201ENST00000607861 441 ntBASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC171Q6TFL3 SNORD56.4-201ENST00000363883 71 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 RNU6-968P-201ENST00000384076 107 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 MIR7-2-201ENST00000384970 110 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 TPMTP3-201ENST00000411928 735 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 AL139421.1-201ENST00000423010 169 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 MTCO3P5-201ENST00000433620 714 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 AL596276.1-201ENST00000434465 418 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 USP9YP22-201ENST00000438971 294 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 RPL31P3-201ENST00000458430 332 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 AC008628.1-201ENST00000508663 265 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 AC103833.1-201ENST00000517442 172 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 AC109329.1-201ENST00000518744 317 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 AC011712.1-201ENST00000588959 234 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 RPL30P11-203ENST00000598995 310 ntBASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
CCDC171Q6TFL3 DDX43P2-201ENST00000604753 1354 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 RNU6-1235P-201ENST00000384559 107 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 USP9YP33-201ENST00000412220 421 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 AL121578.1-201ENST00000428051 892 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 AL591043.1-201ENST00000432461 424 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 MTND4LP16-201ENST00000440828 295 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 RNU6-498P-201ENST00000459468 107 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 AC026410.2-201ENST00000460281 156 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 AL391646.1-201ENST00000603860 190 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 MIR98-201ENST00000606724 119 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 AL132822.1-201ENST00000617063 513 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 MIR8063-201ENST00000621930 81 ntBASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.7□□□□□ -2.3
CCDC171Q6TFL3 RNA5SP347-201ENST00000362445 119 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 SNORD114-26-201ENST00000363543 72 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 RNU6-1066P-201ENST00000363573 105 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 RNU6-1078P-201ENST00000364522 103 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 MIR217-201ENST00000384817 110 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 MIR216A-201ENST00000385063 110 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 RNU6-575P-201ENST00000411326 105 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 HSPE1P13-201ENST00000451143 297 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 AC116655.1-201ENST00000508324 901 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 ACA59.2-201ENST00000517061 156 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 AC022861.1-201ENST00000522981 663 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 RN7SL793P-201ENST00000583259 296 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 AL512605.2-201ENST00000592972 256 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 AL021879.1-201ENST00000611756 288 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 AC099654.5-201ENST00000636479 350 ntBASIC0.69□□□□□ -2.3
CCDC171Q6TFL3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 RNU6-1280P-201ENST00000365211 107 ntBASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 RNU2-32P-201ENST00000411193 191 ntBASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 RNU2-64P-201ENST00000411315 191 ntBASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 EIF1P1-201ENST00000421436 341 ntBASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 OR6C5P-201ENST00000452388 923 ntBASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 AC091860.1-201ENST00000505723 432 ntBASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 RNU5B-3P-201ENST00000516601 115 ntBASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 AC084824.4-201ENST00000620106 731 ntBASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 AC019226.1-201ENST00000625666 515 ntBASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CCDC171Q6TFL3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CCDC171Q6TFL3 RNU6-28P-201ENST00000362378 107 ntBASIC0.67□□□□□ -2.3
CCDC171Q6TFL3 RNU6-1167P-201ENST00000363227 94 ntBASIC0.67□□□□□ -2.3
CCDC171Q6TFL3 RNA5SP499-201ENST00000363982 119 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms