Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 POLHP1-201ENST00000411806 470 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AL158823.1-201ENST00000418441 478 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AL592045.1-201ENST00000429867 352 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 MTND4P25-201ENST00000441039 533 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AC009238.1-201ENST00000442165 424 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AL022238.1-201ENST00000442557 355 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AC009237.6-201ENST00000446969 424 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 FABP5P15-201ENST00000453566 214 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AC013267.1-201ENST00000458227 267 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 RNU6-250P-201ENST00000516958 103 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 RNU2-46P-201ENST00000517038 113 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AC022878.1-201ENST00000530684 149 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AC007834.2-201ENST00000536310 343 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 OSBPL9P5-201ENST00000542581 171 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 RPL21P5-201ENST00000554662 472 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AC021739.1-201ENST00000559631 174 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AL358072.1-201ENST00000604156 575 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AC091152.3-201ENST00000604227 325 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 RNU6-87P-201ENST00000607561 108 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AC130324.3-201ENST00000614165 542 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 AL603839.4-201ENST00000624658 1005 ntBASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SMARCD3Q6STE5 U3.4-201ENST00000363352 213 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 SNORA26.9-201ENST00000391322 122 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 Y_RNA.598-201ENST00000410480 95 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 RNU2-62P-201ENST00000410868 191 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 RNA5SP450-201ENST00000411206 102 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC114491.1-201ENST00000416095 246 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC244636.1-201ENST00000421152 228 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 RAC1P6-201ENST00000423911 575 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 ISCA1P1-201ENST00000426679 387 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC104651.1-201ENST00000427559 735 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 GPM6BP2-201ENST00000432046 144 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 RPL36AP53-201ENST00000432891 316 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC104850.1-201ENST00000435940 476 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 MTND6P13-201ENST00000443510 523 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 GPM6BP1-201ENST00000446387 144 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 SNRPGP9-201ENST00000456025 225 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 MTND1P22-201ENST00000510572 951 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 RNU6-970P-201ENST00000516312 107 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 RNU6-295P-201ENST00000516901 104 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC006199.1-201ENST00000548728 219 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC005771.1-201ENST00000585581 349 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 CLIC4P2-201ENST00000601934 717 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 SEPT7P9-203ENST00000604116 343 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC126118.1-201ENST00000607744 628 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC091304.9-201ENST00000612091 226 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 MIR6845-201ENST00000613182 61 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 AL359854.1-201ENST00000614203 1594 ntBASIC1.46□□□□□ -2.18
SMARCD3Q6STE5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 AL356292.1-201ENST00000283110 373 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 MIR126-201ENST00000362291 85 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 SNORD56.2-201ENST00000363242 71 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 U8.3-201ENST00000363321 132 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 RNY4P34-201ENST00000364779 95 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 SNORA4.3-201ENST00000365564 137 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 RNU6-946P-201ENST00000383878 107 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 RNU6-297P-201ENST00000384636 107 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 RNU6-19P-201ENST00000384718 107 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 SNORA40.3-201ENST00000390964 122 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 AL049545.1-201ENST00000401856 572 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 RPS12P24-201ENST00000412619 387 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 AL353729.1-201ENST00000425044 720 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 MTATP6P17-201ENST00000431030 672 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 CETN4P-201ENST00000432407 469 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 AC119618.1-201ENST00000434191 222 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 AL031667.1-201ENST00000440222 725 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 AC007677.1-201ENST00000445757 515 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 HMGN2P10-201ENST00000448085 265 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 MTND1P12-201ENST00000455231 147 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 AP001324.2-201ENST00000461163 319 ntBASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.45□□□□□ -2.18
SMARCD3Q6STE5 HMGB1P35-201ENST00000503360 598 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms