Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TTC39AQ5SRH9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 AL161431.1-201ENST00000618966 4205 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 FTLP6-201ENST00000355274 422 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 Y_RNA.58-201ENST00000362807 102 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 Y_RNA.154-201ENST00000363624 102 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 RNU6-82P-201ENST00000363970 107 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 RNA5SP139-201ENST00000364340 117 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 RNY3P1-201ENST00000365085 102 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 RNY3-201ENST00000365484 102 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 Y_RNA.490-201ENST00000384413 102 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 MIR493-201ENST00000385254 89 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 USP9YP20-201ENST00000419224 558 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 MTND4P17-201ENST00000470444 350 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 RPS26P21-201ENST00000475397 348 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 AC006445.2-201ENST00000510061 472 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 RPL23AP94-201ENST00000512518 302 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 MIR4635-201ENST00000583759 79 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 AC103705.1-201ENST00000619013 241 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 AC006026.1-201ENST00000444025 1803 ntBASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TTC39AQ5SRH9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 Y_RNA.11-201ENST00000362375 109 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 RNU6-1303P-201ENST00000364841 107 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 Y_RNA.301-201ENST00000364990 103 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 RNU6-434P-201ENST00000384376 107 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 Y_RNA.535-201ENST00000384612 99 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 MIR578-201ENST00000384828 96 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 RPL21P90-201ENST00000415692 466 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 AC104332.2-201ENST00000429959 156 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 AL591704.1-201ENST00000432574 275 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 HMGB1P18-201ENST00000438801 619 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 RPL37P6-201ENST00000460682 294 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 RPL7P43-201ENST00000478876 753 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 FGF7P4-201ENST00000509595 295 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 AC096725.1-201ENST00000514266 313 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 RNU6-277P-201ENST00000516272 106 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 RNU6-1088P-201ENST00000516850 104 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 AC090115.3-201ENST00000553218 849 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 AL355375.2-201ENST00000574825 175 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 MIR3162-201ENST00000581818 82 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 MIR4672-201ENST00000583126 81 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 U2.17-201ENST00000611454 95 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 MIR1302-1-201ENST00000637932 143 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 AL136360.1-201ENST00000503377 1900 ntBASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.24□□□□□ -1.89
TTC39AQ5SRH9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 RNU6-371P-201ENST00000364283 108 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 RNU6-45P-201ENST00000384471 107 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 TMEM167AP1-201ENST00000423409 219 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AL356867.1-201ENST00000429623 299 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 RPL23AP58-201ENST00000440453 469 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 PIGFP3-201ENST00000441918 722 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AC087884.1-201ENST00000469738 328 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 KC877373.1-201ENST00000479066 408 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 RNU6-864P-201ENST00000516256 108 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AC073539.2-201ENST00000597113 165 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AL356055.1-201ENST00000602528 446 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AC104237.2-201ENST00000612456 443 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AC092608.2-201ENST00000624427 218 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AC121333.1-201ENST00000567488 2709 ntBASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC39AQ5SRH9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 Y_RNA.67-201ENST00000362870 100 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 RNU6-254P-201ENST00000363377 107 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 Y_RNA.399-201ENST00000383955 105 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 MIR325-201ENST00000385260 98 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 EIF4E2P1-201ENST00000393781 255 ntBASIC3.22□□□□□ -1.89
TTC39AQ5SRH9 AL590004.2-201ENST00000404787 371 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms