Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC132479.1-201ENST00000449160 144 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.42□□□□□ -2.02
GABPAQ06546 RNU7-182P-201ENST00000459009 62 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.42□□□□□ -2.02
GABPAQ06546 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.42□□□□□ -2.02
GABPAQ06546 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.42□□□□□ -2.02
GABPAQ06546 AP003072.2-201ENST00000527756 676 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.42□□□□□ -2.02
GABPAQ06546 SUB1P2-201ENST00000556401 297 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 MIR3611-201ENST00000584484 83 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 AC073648.5-201ENST00000603502 305 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 AC104237.2-201ENST00000612456 443 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 AC005332.10-201ENST00000612725 619 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
GABPAQ06546 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.42□□□□□ -2.02
GABPAQ06546 AC009161.2-201ENST00000624626 138 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.42□□□□□ -2.02
GABPAQ06546 SEPT14P19-203ENST00000633205 211 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 FO624990.1-201ENST00000636373 85 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 HSPA8P4-201ENST00000511877 1920 ntBASIC2.42□□□□□ -2.02
GABPAQ06546 CDC27P3-201ENST00000635418 1910 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
GABPAQ06546 MIR412-201ENST00000362142 91 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 SNORD3E-201ENST00000362899 217 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 RNU6-371P-201ENST00000364283 108 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 MIR218-1-201ENST00000384999 110 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 RNU2-9P-201ENST00000410194 145 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 OR6C66P-201ENST00000414917 930 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AL031779.1-201ENST00000415663 330 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AC016831.2-201ENST00000417179 352 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.41□□□□□ -2.02
GABPAQ06546 AL365338.1-201ENST00000422282 858 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AC003685.2-201ENST00000422795 395 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 MTCO2P11-201ENST00000431069 680 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AL591806.2-201ENST00000433122 173 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.41□□□□□ -2.02
GABPAQ06546 CR769767.1-201ENST00000436337 346 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.41□□□□□ -2.02
GABPAQ06546 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.41□□□□□ -2.02
GABPAQ06546 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
GABPAQ06546 AL441985.1-201ENST00000457727 251 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AC022364.2-201ENST00000457963 554 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AC117522.2-201ENST00000510049 657 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.41□□□□□ -2.02
GABPAQ06546 SNORA31.18-201ENST00000517043 134 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 ACA59.2-201ENST00000517061 156 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 RNU6-685P-201ENST00000517088 95 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.41□□□□□ -2.02
GABPAQ06546 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.41□□□□□ -2.02
GABPAQ06546 MIR4446-201ENST00000578505 67 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 MIR4775-201ENST00000581168 75 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 NBR2-204ENST00000587322 63 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AL138889.2-201ENST00000603883 242 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AC011890.2-201ENST00000613393 294 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 Y_RNA.783-201ENST00000613546 102 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 AC009509.4-201ENST00000619202 509 ntBASIC2.41□□□□□ -2.02
GABPAQ06546 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.41□□□□□ -2.02
GABPAQ06546 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.41□□□□□ -2.02
GABPAQ06546 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
GABPAQ06546 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
GABPAQ06546 AL356292.1-201ENST00000283110 373 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.4□□□□□ -2.03
GABPAQ06546 Y_RNA.51-201ENST00000362725 102 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 MIR518D-201ENST00000385014 87 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 DEFB108C-201ENST00000400154 252 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.4□□□□□ -2.03
GABPAQ06546 MTCYBP5-201ENST00000423752 1135 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.4□□□□□ -2.03
GABPAQ06546 AC000111.3-201ENST00000433478 193 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.4□□□□□ -2.03
GABPAQ06546 FABP5P14-201ENST00000437273 393 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 RPS15AP9-201ENST00000439856 381 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 AL445687.1-201ENST00000439946 251 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 AC104058.1-201ENST00000448028 297 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 AL162395.1-201ENST00000457882 422 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 RPS29P15-201ENST00000458329 171 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.4□□□□□ -2.03
GABPAQ06546 AC010493.1-201ENST00000513479 292 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 RNA5SP503-201ENST00000517047 117 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.4□□□□□ -2.03
GABPAQ06546 MIR5692A1-201ENST00000580523 69 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 MIR4524B-201ENST00000581569 115 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 MIR4765-201ENST00000585007 77 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 AC087045.1-201ENST00000605856 382 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.4□□□□□ -2.03
GABPAQ06546 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.4□□□□□ -2.03
GABPAQ06546 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
GABPAQ06546 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
GABPAQ06546 AC080128.1-201ENST00000474389 1917 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.39□□□□□ -2.03
GABPAQ06546 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
GABPAQ06546 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
GABPAQ06546 RNU4-48P-201ENST00000365559 182 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 MIR10A-201ENST00000385043 110 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 EEF1A1P40-201ENST00000412883 573 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 AL627311.1-201ENST00000431514 115 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms