Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 AC012065.4-201ENST00000602445 679 ntBASIC2.14□□□□□ -2.07
CSTF1Q05048 AL355297.2-201ENST00000604792 129 ntBASIC2.14□□□□□ -2.07
CSTF1Q05048 AC068276.1-201ENST00000605793 379 ntBASIC2.14□□□□□ -2.07
CSTF1Q05048 AC012360.2-201ENST00000609349 391 ntBASIC2.14□□□□□ -2.07
CSTF1Q05048 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CSTF1Q05048 AC091931.1-201ENST00000623488 728 ntBASIC2.14□□□□□ -2.07
CSTF1Q05048 MIR203B-201ENST00000636080 86 ntBASIC2.14□□□□□ -2.07
CSTF1Q05048 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CSTF1Q05048 ZNF720P1-201ENST00000562403 1939 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CSTF1Q05048 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CSTF1Q05048 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CSTF1Q05048 SNORA6-201ENST00000384033 151 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 SNORD116-8-201ENST00000384365 95 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 SNORA24.1-201ENST00000384401 135 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 RNU6-1179P-201ENST00000384667 107 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 RNU6-195P-201ENST00000411352 109 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.13□□□□□ -2.07
CSTF1Q05048 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.13□□□□□ -2.07
CSTF1Q05048 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.13□□□□□ -2.07
CSTF1Q05048 AC104850.1-201ENST00000435940 476 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.13□□□□□ -2.07
CSTF1Q05048 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.13□□□□□ -2.07
CSTF1Q05048 MTCO2P29-201ENST00000465212 189 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.13□□□□□ -2.07
CSTF1Q05048 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.13□□□□□ -2.07
CSTF1Q05048 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.13□□□□□ -2.07
CSTF1Q05048 AK6P1-201ENST00000540219 478 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.13□□□□□ -2.07
CSTF1Q05048 MIR3915-201ENST00000578518 97 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 AL670379.10-201ENST00000604330 253 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 AL670379.9-201ENST00000605428 253 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 AC012409.4-201ENST00000612923 249 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 AC093783.1-201ENST00000612976 329 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 U6.42-201ENST00000618440 107 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 AC009831.4-201ENST00000620744 325 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.13□□□□□ -2.07
CSTF1Q05048 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
CSTF1Q05048 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CSTF1Q05048 AC138393.1-203ENST00000327086 343 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 MIR337-201ENST00000362281 93 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 SNORA75B-201ENST00000384053 137 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 SNORA51.11-201ENST00000384442 131 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 Y_RNA.508-201ENST00000384502 114 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 RPL23AP32-201ENST00000395315 459 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 RPS3AP36-201ENST00000398190 775 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 RNU2-8P-201ENST00000410727 190 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.12□□□□□ -2.07
CSTF1Q05048 Z99497.1-201ENST00000421282 135 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.12□□□□□ -2.07
CSTF1Q05048 RPS6P15-201ENST00000431996 751 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 AL353706.1-201ENST00000436728 494 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 TAF9P1-201ENST00000445421 515 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.12□□□□□ -2.07
CSTF1Q05048 TAF9P2-201ENST00000454958 515 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.12□□□□□ -2.07
CSTF1Q05048 BET1P1-201ENST00000482276 359 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.12□□□□□ -2.07
CSTF1Q05048 RBBP4P6-201ENST00000508098 202 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 AC118273.2-201ENST00000532092 465 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 AC012414.6-201ENST00000568241 401 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 AC137800.2-201ENST00000574375 120 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 LRRC37A5P-203ENST00000580181 585 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 AC110760.3-201ENST00000598794 467 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 snoU13.31-201ENST00000607291 104 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.12□□□□□ -2.07
CSTF1Q05048 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.12□□□□□ -2.07
CSTF1Q05048 AL157786.1-207ENST00000627771 695 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 AC099654.13-201ENST00000639774 207 ntBASIC2.12□□□□□ -2.07
CSTF1Q05048 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSTF1Q05048 RNU1-148P-201ENST00000384472 162 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 MIR518D-201ENST00000385014 87 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 MIR10A-201ENST00000385043 110 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 RNU2-2P-201ENST00000410396 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 Y_RNA.623-201ENST00000411128 95 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 AL160275.3-201ENST00000423876 471 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 PGBD4P3-201ENST00000440731 581 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 MTND2P22-201ENST00000444325 1033 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.11□□□□□ -2.07
CSTF1Q05048 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.11□□□□□ -2.07
CSTF1Q05048 FABP5P5-201ENST00000515537 406 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 RNU2-46P-201ENST00000517038 113 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.11□□□□□ -2.07
CSTF1Q05048 AC022616.3-201ENST00000523940 148 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.11□□□□□ -2.07
CSTF1Q05048 MIR3126-201ENST00000577443 74 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.11□□□□□ -2.07
CSTF1Q05048 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
CSTF1Q05048 MIR548AC-201ENST00000585049 88 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 AL139286.2-201ENST00000606838 396 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 U2.15-201ENST00000611544 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 U2.16-201ENST00000613119 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 Y_RNA.783-201ENST00000613546 102 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 U2.12-201ENST00000613778 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 U2.20-201ENST00000613956 192 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 U2.9-201ENST00000615427 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 U2.11-201ENST00000616345 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 U2.2-201ENST00000616535 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 U2.3-201ENST00000617785 191 ntBASIC2.11□□□□□ -2.07
CSTF1Q05048 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms