Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.15□□□□□ -2.23
HOXC5Q00444 AC013828.2-201ENST00000532487 235 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 AC092325.1-201ENST00000566449 554 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 MIR3198-2-201ENST00000577868 80 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.15□□□□□ -2.23
HOXC5Q00444 MTND3P19-201ENST00000603825 345 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 CYP2C61P-201ENST00000604072 290 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.15□□□□□ -2.23
HOXC5Q00444 AL022345.1-201ENST00000607292 135 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.15□□□□□ -2.23
HOXC5Q00444 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.15□□□□□ -2.23
HOXC5Q00444 U1.36-201ENST00000620684 176 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 AC091965.5-201ENST00000624785 342 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.15□□□□□ -2.23
HOXC5Q00444 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HOXC5Q00444 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
HOXC5Q00444 AC091812.1-201ENST00000432235 1948 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 AC092104.1-201ENST00000497346 1441 ntBASIC1.15□□□□□ -2.23
HOXC5Q00444 Y_RNA.33-201ENST00000362591 102 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 RNU6-212P-201ENST00000362642 104 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 RNU6-655P-201ENST00000362858 107 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 SNORD116.1-201ENST00000365628 92 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HOXC5Q00444 MIR30A-201ENST00000385092 71 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 SNORA40.6-201ENST00000391153 128 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.14□□□□□ -2.23
HOXC5Q00444 TOMM20P4-201ENST00000427861 435 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 AC108667.1-201ENST00000428618 249 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.14□□□□□ -2.23
HOXC5Q00444 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.14□□□□□ -2.23
HOXC5Q00444 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.14□□□□□ -2.23
HOXC5Q00444 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.14□□□□□ -2.23
HOXC5Q00444 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.14□□□□□ -2.23
HOXC5Q00444 AC093899.1-201ENST00000457984 376 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 snoU13.23-201ENST00000458863 104 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 RNU7-95P-201ENST00000459222 64 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 RPL31P58-201ENST00000469001 379 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.14□□□□□ -2.23
HOXC5Q00444 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.14□□□□□ -2.23
HOXC5Q00444 RNA5SP216-201ENST00000516111 123 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.14□□□□□ -2.23
HOXC5Q00444 AC022616.8-201ENST00000533569 253 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.14□□□□□ -2.23
HOXC5Q00444 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.14□□□□□ -2.23
HOXC5Q00444 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.14□□□□□ -2.23
HOXC5Q00444 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.14□□□□□ -2.23
HOXC5Q00444 MIR4421-201ENST00000578133 69 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 MIR544B-201ENST00000582372 78 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 AP001485.1-201ENST00000604799 199 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 PRR13P7-201ENST00000605538 430 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 AC006386.1-201ENST00000619436 415 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 AL356596.1-201ENST00000624230 379 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 MIR3529-201ENST00000637713 78 ntBASIC1.14□□□□□ -2.23
HOXC5Q00444 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
HOXC5Q00444 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HOXC5Q00444 SNORD3E-201ENST00000362899 217 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 Y_RNA.465-201ENST00000384293 102 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 RNU6-769P-201ENST00000384407 104 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 RNU6-843P-201ENST00000384454 104 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 ERHP2-201ENST00000402323 299 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 SNORA11.2-201ENST00000408318 127 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 RN7SKP284-201ENST00000411002 343 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 ELOCP17-201ENST00000414751 326 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 ELOCP9-201ENST00000418624 239 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.13□□□□□ -2.23
HOXC5Q00444 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.13□□□□□ -2.23
HOXC5Q00444 TXNL1P1-201ENST00000429528 554 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AL591704.1-201ENST00000432574 275 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.13□□□□□ -2.23
HOXC5Q00444 AC104058.1-201ENST00000448028 297 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.13□□□□□ -2.23
HOXC5Q00444 HMGB1P30-201ENST00000492455 606 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AC010587.2-201ENST00000511727 448 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 RNVU1-2-201ENST00000516326 135 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 RNU6-677P-201ENST00000516914 101 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AC091163.3-201ENST00000518269 1144 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.13□□□□□ -2.23
HOXC5Q00444 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.13□□□□□ -2.23
HOXC5Q00444 VN1R82P-201ENST00000601481 356 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AC078795.2-201ENST00000602835 1252 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AL670379.6-201ENST00000603753 252 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AL670379.11-201ENST00000604059 253 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AC008162.1-201ENST00000604718 254 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AL670379.1-201ENST00000604752 252 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AP000860.1-201ENST00000605250 559 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AL670379.5-201ENST00000605253 252 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AL670379.12-201ENST00000605291 253 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 BCRP9-201ENST00000605312 388 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AL670379.8-201ENST00000605353 252 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AL670379.7-201ENST00000605823 252 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AC091965.4-201ENST00000607691 587 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AL512598.1-201ENST00000610158 273 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AL365204.3-201ENST00000612448 685 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.13□□□□□ -2.23
HOXC5Q00444 AL353997.5-201ENST00000618886 171 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AC099842.1-201ENST00000619919 596 ntBASIC1.13□□□□□ -2.23
HOXC5Q00444 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms