Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CBX1P83916 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.97□□□□□ -2.09
CBX1P83916 TOMM20P4-201ENST00000427861 435 ntBASIC1.97□□□□□ -2.09
CBX1P83916 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.97□□□□□ -2.09
CBX1P83916 MTND1P30-201ENST00000441241 901 ntBASIC1.97□□□□□ -2.09
CBX1P83916 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.97□□□□□ -2.09
CBX1P83916 AP001025.1-201ENST00000486139 332 ntBASIC1.97□□□□□ -2.09
CBX1P83916 HMGB1P35-201ENST00000503360 598 ntBASIC1.97□□□□□ -2.09
CBX1P83916 RANP3-201ENST00000530970 276 ntBASIC1.97□□□□□ -2.09
CBX1P83916 NDUFA5P6-201ENST00000542110 379 ntBASIC1.97□□□□□ -2.09
CBX1P83916 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.97□□□□□ -2.09
CBX1P83916 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.97□□□□□ -2.09
CBX1P83916 MIR4287-201ENST00000579398 78 ntBASIC1.97□□□□□ -2.09
CBX1P83916 MIR4435-1-201ENST00000582552 80 ntBASIC1.97□□□□□ -2.09
CBX1P83916 AC005771.1-201ENST00000585581 349 ntBASIC1.97□□□□□ -2.09
CBX1P83916 WISP1-OT1-201ENST00000602893 642 ntBASIC1.97□□□□□ -2.09
CBX1P83916 AL033523.1-201ENST00000605153 153 ntBASIC1.97□□□□□ -2.09
CBX1P83916 AL670379.4-201ENST00000605279 254 ntBASIC1.97□□□□□ -2.09
CBX1P83916 AC092354.1-201ENST00000606057 376 ntBASIC1.97□□□□□ -2.09
CBX1P83916 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.97□□□□□ -2.09
CBX1P83916 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.97□□□□□ -2.09
CBX1P83916 AC009487.4-201ENST00000624969 3585 ntBASIC1.97□□□□□ -2.09
CBX1P83916 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CBX1P83916 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CBX1P83916 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
CBX1P83916 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CBX1P83916 RNU6-655P-201ENST00000362858 107 ntBASIC1.96□□□□□ -2.1
CBX1P83916 RNU6-179P-201ENST00000363350 107 ntBASIC1.96□□□□□ -2.1
CBX1P83916 SNORA16.1-201ENST00000364597 132 ntBASIC1.96□□□□□ -2.1
CBX1P83916 U3.13-201ENST00000364804 214 ntBASIC1.96□□□□□ -2.1
CBX1P83916 RNU6-387P-201ENST00000411331 105 ntBASIC1.96□□□□□ -2.1
CBX1P83916 EEF1A1P40-201ENST00000412883 573 ntBASIC1.96□□□□□ -2.1
CBX1P83916 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.96□□□□□ -2.1
CBX1P83916 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.96□□□□□ -2.1
CBX1P83916 MTND4P20-201ENST00000424125 869 ntBASIC1.96□□□□□ -2.1
CBX1P83916 MTND5P25-201ENST00000430499 799 ntBASIC1.96□□□□□ -2.1
CBX1P83916 MTCO3P5-201ENST00000433620 714 ntBASIC1.96□□□□□ -2.1
CBX1P83916 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.96□□□□□ -2.1
CBX1P83916 AL360271.2-201ENST00000447710 161 ntBASIC1.96□□□□□ -2.1
CBX1P83916 AC108938.1-201ENST00000451204 136 ntBASIC1.96□□□□□ -2.1
CBX1P83916 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.96□□□□□ -2.1
CBX1P83916 RNU7-125P-201ENST00000458760 62 ntBASIC1.96□□□□□ -2.1
CBX1P83916 RAP1BP2-201ENST00000478270 544 ntBASIC1.96□□□□□ -2.1
CBX1P83916 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.96□□□□□ -2.1
CBX1P83916 MRPS17P9-201ENST00000511924 393 ntBASIC1.96□□□□□ -2.1
CBX1P83916 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.96□□□□□ -2.1
CBX1P83916 RNU6-1220P-201ENST00000517126 108 ntBASIC1.96□□□□□ -2.1
CBX1P83916 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.96□□□□□ -2.1
CBX1P83916 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CBX1P83916 ZNF321P-202ENST00000550843 495 ntBASIC1.96□□□□□ -2.1
CBX1P83916 AC008015.1-201ENST00000555505 465 ntBASIC1.96□□□□□ -2.1
CBX1P83916 MIR4419B-201ENST00000577260 68 ntBASIC1.96□□□□□ -2.1
CBX1P83916 MIR5692A1-201ENST00000580523 69 ntBASIC1.96□□□□□ -2.1
CBX1P83916 AC012065.4-201ENST00000602445 679 ntBASIC1.96□□□□□ -2.1
CBX1P83916 AL670379.2-201ENST00000604983 252 ntBASIC1.96□□□□□ -2.1
CBX1P83916 AL133173.2-201ENST00000614270 90 ntBASIC1.96□□□□□ -2.1
CBX1P83916 AC090517.3-201ENST00000625170 141 ntBASIC1.96□□□□□ -2.1
CBX1P83916 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.96□□□□□ -2.1
CBX1P83916 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CBX1P83916 MTND4P4-201ENST00000439033 1366 ntBASIC1.96□□□□□ -2.1
CBX1P83916 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CBX1P83916 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CBX1P83916 RNU6-529P-201ENST00000363383 104 ntBASIC1.95□□□□□ -2.1
CBX1P83916 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CBX1P83916 RNA5SP390-201ENST00000410191 113 ntBASIC1.95□□□□□ -2.1
CBX1P83916 SNORD56-201ENST00000413522 71 ntBASIC1.95□□□□□ -2.1
CBX1P83916 RPL21P90-201ENST00000415692 466 ntBASIC1.95□□□□□ -2.1
CBX1P83916 AL139413.1-201ENST00000421309 217 ntBASIC1.95□□□□□ -2.1
CBX1P83916 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.95□□□□□ -2.1
CBX1P83916 AC104850.1-201ENST00000435940 476 ntBASIC1.95□□□□□ -2.1
CBX1P83916 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.95□□□□□ -2.1
CBX1P83916 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.95□□□□□ -2.1
CBX1P83916 SNRPFP4-201ENST00000456366 242 ntBASIC1.95□□□□□ -2.1
CBX1P83916 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.95□□□□□ -2.1
CBX1P83916 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.95□□□□□ -2.1
CBX1P83916 AC010486.1-201ENST00000511793 424 ntBASIC1.95□□□□□ -2.1
CBX1P83916 SCARNA24.1-201ENST00000516465 137 ntBASIC1.95□□□□□ -2.1
CBX1P83916 RN7SKP287-201ENST00000516546 266 ntBASIC1.95□□□□□ -2.1
CBX1P83916 SNORA43.2-201ENST00000516652 128 ntBASIC1.95□□□□□ -2.1
CBX1P83916 RNU2-46P-201ENST00000517038 113 ntBASIC1.95□□□□□ -2.1
CBX1P83916 RNU6-232P-201ENST00000517144 64 ntBASIC1.95□□□□□ -2.1
CBX1P83916 AC106038.2-201ENST00000520706 568 ntBASIC1.95□□□□□ -2.1
CBX1P83916 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.95□□□□□ -2.1
CBX1P83916 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.95□□□□□ -2.1
CBX1P83916 MIR548AB-201ENST00000584917 84 ntBASIC1.95□□□□□ -2.1
CBX1P83916 BNIP3P8-201ENST00000597863 560 ntBASIC1.95□□□□□ -2.1
CBX1P83916 SNRPGP17-201ENST00000603780 214 ntBASIC1.95□□□□□ -2.1
CBX1P83916 AC093424.1-201ENST00000604999 338 ntBASIC1.95□□□□□ -2.1
CBX1P83916 AL121992.2-201ENST00000606262 256 ntBASIC1.95□□□□□ -2.1
CBX1P83916 AC012360.2-201ENST00000609349 391 ntBASIC1.95□□□□□ -2.1
CBX1P83916 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.95□□□□□ -2.1
CBX1P83916 AC079248.2-201ENST00000623779 326 ntBASIC1.95□□□□□ -2.1
CBX1P83916 AL359740.1-201ENST00000624340 592 ntBASIC1.95□□□□□ -2.1
CBX1P83916 RNU6-371P-201ENST00000364283 108 ntBASIC1.94□□□□□ -2.1
CBX1P83916 SNORA40.19-201ENST00000390846 128 ntBASIC1.94□□□□□ -2.1
CBX1P83916 AL031577.2-201ENST00000404133 280 ntBASIC1.94□□□□□ -2.1
CBX1P83916 AL512604.1-201ENST00000404812 257 ntBASIC1.94□□□□□ -2.1
CBX1P83916 RNU2-23P-201ENST00000410545 195 ntBASIC1.94□□□□□ -2.1
CBX1P83916 AC074117.2-201ENST00000417130 397 ntBASIC1.94□□□□□ -2.1
CBX1P83916 EIF1AXP1-201ENST00000419267 435 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms