Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC009474.2-201ENST00000451383 136 ntBASIC0.79□□□□□ -2.28
VBP1P61758 RPL18AP17-201ENST00000455326 198 ntBASIC0.79□□□□□ -2.28
VBP1P61758 RPL30P6-201ENST00000475925 342 ntBASIC0.79□□□□□ -2.28
VBP1P61758 AC087343.1-201ENST00000477341 475 ntBASIC0.79□□□□□ -2.28
VBP1P61758 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.79□□□□□ -2.28
VBP1P61758 AC098799.1-201ENST00000504752 800 ntBASIC0.79□□□□□ -2.28
VBP1P61758 AC103851.1-201ENST00000506833 274 ntBASIC0.79□□□□□ -2.28
VBP1P61758 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.79□□□□□ -2.28
VBP1P61758 AL356057.1-201ENST00000533798 831 ntBASIC0.79□□□□□ -2.28
VBP1P61758 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.79□□□□□ -2.28
VBP1P61758 AL512310.8-201ENST00000550183 120 ntBASIC0.79□□□□□ -2.28
VBP1P61758 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.79□□□□□ -2.28
VBP1P61758 AC025678.1-201ENST00000567861 338 ntBASIC0.79□□□□□ -2.28
VBP1P61758 AC104072.1-201ENST00000568817 668 ntBASIC0.79□□□□□ -2.28
VBP1P61758 AC123767.1-202ENST00000620407 817 ntBASIC0.79□□□□□ -2.28
VBP1P61758 MIR3529-201ENST00000637713 78 ntBASIC0.79□□□□□ -2.28
VBP1P61758 MTND4P21-201ENST00000453886 1357 ntBASIC0.79□□□□□ -2.28
VBP1P61758 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.79□□□□□ -2.28
VBP1P61758 SNORA7.1-201ENST00000363750 139 ntBASIC0.78□□□□□ -2.28
VBP1P61758 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
VBP1P61758 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VBP1P61758 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VBP1P61758 CBX3P9-201ENST00000402326 552 ntBASIC0.78□□□□□ -2.28
VBP1P61758 AC006461.1-201ENST00000412637 326 ntBASIC0.78□□□□□ -2.28
VBP1P61758 MTCO1P3-201ENST00000429327 192 ntBASIC0.78□□□□□ -2.28
VBP1P61758 KATNBL1P3-201ENST00000443475 909 ntBASIC0.78□□□□□ -2.28
VBP1P61758 AC012308.1-201ENST00000451232 178 ntBASIC0.78□□□□□ -2.28
VBP1P61758 MTND2P30-201ENST00000456663 382 ntBASIC0.78□□□□□ -2.28
VBP1P61758 HMGN2P9-201ENST00000476875 229 ntBASIC0.78□□□□□ -2.28
VBP1P61758 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
VBP1P61758 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.78□□□□□ -2.28
VBP1P61758 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VBP1P61758 MIR5094-201ENST00000578766 85 ntBASIC0.78□□□□□ -2.28
VBP1P61758 MZT1P2-201ENST00000604387 248 ntBASIC0.78□□□□□ -2.28
VBP1P61758 AL353770.2-201ENST00000620024 78 ntBASIC0.78□□□□□ -2.28
VBP1P61758 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.78□□□□□ -2.28
VBP1P61758 AL356094.1-201ENST00000624663 1212 ntBASIC0.78□□□□□ -2.28
VBP1P61758 AC008163.1-202ENST00000636004 2889 ntBASIC0.77□□□□□ -2.29
VBP1P61758 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
VBP1P61758 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
VBP1P61758 RNU6-858P-201ENST00000362436 107 ntBASIC0.77□□□□□ -2.29
VBP1P61758 RNU6-487P-201ENST00000365430 104 ntBASIC0.77□□□□□ -2.29
VBP1P61758 RNU6-1122P-201ENST00000384449 107 ntBASIC0.77□□□□□ -2.29
VBP1P61758 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.77□□□□□ -2.29
VBP1P61758 SNRPEP10-201ENST00000420249 274 ntBASIC0.77□□□□□ -2.29
VBP1P61758 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
VBP1P61758 AL592045.1-201ENST00000429867 352 ntBASIC0.77□□□□□ -2.29
VBP1P61758 C8orf59P1-201ENST00000429930 303 ntBASIC0.77□□□□□ -2.29
VBP1P61758 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.77□□□□□ -2.29
VBP1P61758 HSPE1P9-201ENST00000440046 311 ntBASIC0.77□□□□□ -2.29
VBP1P61758 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.77□□□□□ -2.29
VBP1P61758 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
VBP1P61758 RNA5SP269-201ENST00000459032 137 ntBASIC0.77□□□□□ -2.29
VBP1P61758 RPF2P2-201ENST00000504693 896 ntBASIC0.77□□□□□ -2.29
VBP1P61758 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.77□□□□□ -2.29
VBP1P61758 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
VBP1P61758 RNY4P37-201ENST00000516225 96 ntBASIC0.77□□□□□ -2.29
VBP1P61758 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.77□□□□□ -2.29
VBP1P61758 MTCO3P15-201ENST00000526563 574 ntBASIC0.77□□□□□ -2.29
VBP1P61758 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.77□□□□□ -2.29
VBP1P61758 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.77□□□□□ -2.29
VBP1P61758 AC079148.1-201ENST00000565944 819 ntBASIC0.77□□□□□ -2.29
VBP1P61758 MIR5708-201ENST00000579723 85 ntBASIC0.77□□□□□ -2.29
VBP1P61758 AC126365.2-201ENST00000580630 379 ntBASIC0.77□□□□□ -2.29
VBP1P61758 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.77□□□□□ -2.29
VBP1P61758 BNIP3P30-201ENST00000601184 574 ntBASIC0.77□□□□□ -2.29
VBP1P61758 AP003465.2-201ENST00000602571 373 ntBASIC0.77□□□□□ -2.29
VBP1P61758 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.77□□□□□ -2.29
VBP1P61758 RNU6-354P-201ENST00000383862 107 ntBASIC0.76□□□□□ -2.29
VBP1P61758 RNU6-610P-201ENST00000384264 107 ntBASIC0.76□□□□□ -2.29
VBP1P61758 RNU6-14P-201ENST00000384630 106 ntBASIC0.76□□□□□ -2.29
VBP1P61758 AL359634.1-202ENST00000404721 284 ntBASIC0.76□□□□□ -2.29
VBP1P61758 RPS12P24-201ENST00000412619 387 ntBASIC0.76□□□□□ -2.29
VBP1P61758 SNX2P2-201ENST00000424553 323 ntBASIC0.76□□□□□ -2.29
VBP1P61758 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.76□□□□□ -2.29
VBP1P61758 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.76□□□□□ -2.29
VBP1P61758 HMGN2P18-201ENST00000450680 270 ntBASIC0.76□□□□□ -2.29
VBP1P61758 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.76□□□□□ -2.29
VBP1P61758 MTND2P3-201ENST00000452458 470 ntBASIC0.76□□□□□ -2.29
VBP1P61758 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.76□□□□□ -2.29
VBP1P61758 SNORA3.4-201ENST00000515969 96 ntBASIC0.76□□□□□ -2.29
VBP1P61758 RN7SKP88-201ENST00000516847 250 ntBASIC0.76□□□□□ -2.29
VBP1P61758 CYCSP23-201ENST00000519781 313 ntBASIC0.76□□□□□ -2.29
VBP1P61758 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.76□□□□□ -2.29
VBP1P61758 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.76□□□□□ -2.29
VBP1P61758 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.76□□□□□ -2.29
VBP1P61758 AL133153.1-201ENST00000557756 303 ntBASIC0.76□□□□□ -2.29
VBP1P61758 AC060771.1-201ENST00000582031 164 ntBASIC0.76□□□□□ -2.29
VBP1P61758 7SK.8-201ENST00000612110 250 ntBASIC0.76□□□□□ -2.29
VBP1P61758 7SK.11-201ENST00000615477 250 ntBASIC0.76□□□□□ -2.29
VBP1P61758 7SK.13-201ENST00000622040 250 ntBASIC0.76□□□□□ -2.29
VBP1P61758 OR4G3P-201ENST00000633500 913 ntBASIC0.76□□□□□ -2.29
VBP1P61758 AC095038.3-201ENST00000634439 195 ntBASIC0.76□□□□□ -2.29
VBP1P61758 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.76□□□□□ -2.29
VBP1P61758 Y_RNA.40-201ENST00000362645 93 ntBASIC0.75□□□□□ -2.29
VBP1P61758 RNU6-744P-201ENST00000365557 107 ntBASIC0.75□□□□□ -2.29
VBP1P61758 RNU6-1316P-201ENST00000384242 108 ntBASIC0.75□□□□□ -2.29
VBP1P61758 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.75□□□□□ -2.29
VBP1P61758 RPS15AP12-201ENST00000419498 388 ntBASIC0.75□□□□□ -2.29
VBP1P61758 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms