Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLRN1P58418 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLRN1P58418 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CLRN1P58418 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLRN1P58418 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CLRN1P58418 RNU6-874P-201ENST00000362390 105 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 Y_RNA.152-201ENST00000363578 100 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 RNU1-100P-201ENST00000365255 165 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 U1.1-201ENST00000384101 164 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CLRN1P58418 RN7SKP53-201ENST00000411337 315 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 RAB9AP3-201ENST00000412737 573 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 AC114482.1-201ENST00000418010 247 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.34□□□□□ -1.87
CLRN1P58418 MTCO3P29-201ENST00000432119 779 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.34□□□□□ -1.87
CLRN1P58418 RPL21P2-201ENST00000440049 481 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 AL731563.1-201ENST00000442202 214 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 RPS3AP12-201ENST00000443616 753 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 AC125238.1-201ENST00000448842 249 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 RAB9AP1-201ENST00000449393 573 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 MTCO3P8-201ENST00000453691 755 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.34□□□□□ -1.87
CLRN1P58418 AC093852.1-201ENST00000503587 266 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.34□□□□□ -1.87
CLRN1P58418 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.34□□□□□ -1.87
CLRN1P58418 HIGD1AP1-201ENST00000550979 275 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.34□□□□□ -1.87
CLRN1P58418 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.34□□□□□ -1.87
CLRN1P58418 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.34□□□□□ -1.87
CLRN1P58418 AL020997.2-201ENST00000602607 184 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 HSPE1P7-201ENST00000604681 321 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 SNORA62.6-201ENST00000606322 83 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.34□□□□□ -1.87
CLRN1P58418 AL354798.1-201ENST00000622505 329 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.34□□□□□ -1.87
CLRN1P58418 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.34□□□□□ -1.87
CLRN1P58418 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLRN1P58418 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.34□□□□□ -1.87
CLRN1P58418 CEP170P1-201ENST00000502249 4587 ntBASIC3.34□□□□□ -1.87
CLRN1P58418 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLRN1P58418 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLRN1P58418 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLRN1P58418 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLRN1P58418 RNU6-702P-201ENST00000364982 107 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 Y_RNA.512-201ENST00000384518 102 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 SNORD116-20-201ENST00000384529 92 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 MIR30B-201ENST00000384850 88 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 SAR1AP2-201ENST00000392696 594 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.33□□□□□ -1.88
CLRN1P58418 AC243964.1-201ENST00000441814 261 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 HMGN2P7-201ENST00000456186 273 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 RN7SKP210-201ENST00000459176 261 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 RN7SL93P-201ENST00000463035 293 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 AL391261.3-201ENST00000557194 520 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.33□□□□□ -1.88
CLRN1P58418 MIR3609-201ENST00000582661 80 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 AC060766.3-201ENST00000591442 263 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 AC006557.5-201ENST00000603126 811 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 AC006077.1-201ENST00000604746 343 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 AC007792.1-201ENST00000623023 402 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 AC073308.1-201ENST00000623696 305 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLRN1P58418 AC009541.1-201ENST00000438279 2662 ntBASIC3.33□□□□□ -1.88
CLRN1P58418 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLRN1P58418 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLRN1P58418 MAPK10-372ENST00000641954 3413 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLRN1P58418 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.32□□□□□ -1.88
CLRN1P58418 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLRN1P58418 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLRN1P58418 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.32□□□□□ -1.88
CLRN1P58418 RNU1-18P-201ENST00000363062 164 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 Y_RNA.405-201ENST00000383979 100 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 Y_RNA.451-201ENST00000384200 100 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 SNORA51.11-201ENST00000384442 131 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 Y_RNA.524-201ENST00000384564 100 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 SNORA1.3-201ENST00000384676 136 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 Y_RNA.561-201ENST00000384694 100 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 SNORA12.2-201ENST00000391040 156 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.32□□□□□ -1.88
CLRN1P58418 FTH1P15-201ENST00000406984 280 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 Y_RNA.592-201ENST00000410274 109 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 AL139247.1-201ENST00000422768 325 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLRN1P58418 AL591419.1-201ENST00000427423 339 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.32□□□□□ -1.88
CLRN1P58418 RPS29P7-201ENST00000439662 171 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 AL031659.1-201ENST00000447075 539 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.32□□□□□ -1.88
CLRN1P58418 AC034236.1-201ENST00000469891 373 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.32□□□□□ -1.88
CLRN1P58418 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.32□□□□□ -1.88
CLRN1P58418 MRPS36P4-201ENST00000534436 298 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.32□□□□□ -1.88
CLRN1P58418 NACAP3-201ENST00000552100 481 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.32□□□□□ -1.88
CLRN1P58418 AC110588.1-201ENST00000559699 137 ntBASIC3.32□□□□□ -1.88
CLRN1P58418 MTND5P7-201ENST00000413558 1798 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms