Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC022149.2-201ENST00000621061 203 ntBASIC3.2□□□□□ -1.9
SUMO3P55854 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.2□□□□□ -1.9
SUMO3P55854 AL034408.1-202ENST00000636088 415 ntBASIC3.2□□□□□ -1.9
SUMO3P55854 RBBP8P1-201ENST00000449447 1844 ntBASIC3.2□□□□□ -1.9
SUMO3P55854 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SUMO3P55854 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SUMO3P55854 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SUMO3P55854 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SUMO3P55854 AL356274.2-201ENST00000624379 3752 ntBASIC3.2□□□□□ -1.9
SUMO3P55854 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.19□□□□□ -1.9
SUMO3P55854 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SUMO3P55854 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.19□□□□□ -1.9
SUMO3P55854 Y_RNA.813-201ENST00000364639 102 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 Y_RNA.315-201ENST00000365117 102 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.19□□□□□ -1.9
SUMO3P55854 RNU6-622P-201ENST00000384272 103 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 MIR521-1-201ENST00000384902 87 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 MIR134-201ENST00000385258 73 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 PTMAP2-201ENST00000397627 327 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.19□□□□□ -1.9
SUMO3P55854 AF228730.4-201ENST00000421457 183 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 AC236972.1-201ENST00000433225 199 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.19□□□□□ -1.9
SUMO3P55854 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SUMO3P55854 RBMY2UP-201ENST00000453474 324 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.19□□□□□ -1.9
SUMO3P55854 RNU7-152P-201ENST00000458982 64 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 Y_RNA.653-201ENST00000459091 95 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 RPS29P27-201ENST00000463711 170 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 RPL23AP67-201ENST00000465341 474 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SUMO3P55854 RAC1P5-201ENST00000512182 576 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 AC108043.1-201ENST00000512696 574 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.19□□□□□ -1.9
SUMO3P55854 AC026333.2-201ENST00000542164 106 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.19□□□□□ -1.9
SUMO3P55854 AC009229.3-201ENST00000608056 282 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 AC107294.3-201ENST00000609211 526 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 AL157817.1-201ENST00000614264 790 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 UCA1.1-201ENST00000620952 75 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 AC092628.2-201ENST00000622492 339 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 AL669831.3-213ENST00000636676 183 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 AC012442.3-202ENST00000636742 206 ntBASIC3.19□□□□□ -1.9
SUMO3P55854 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.19□□□□□ -1.9
SUMO3P55854 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.19□□□□□ -1.9
SUMO3P55854 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SUMO3P55854 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SUMO3P55854 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SUMO3P55854 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SUMO3P55854 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.19□□□□□ -1.9
SUMO3P55854 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SUMO3P55854 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.18□□□□□ -1.9
SUMO3P55854 RNU6-694P-201ENST00000364071 147 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 SNORA62.3-201ENST00000365110 153 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 RNU6-842P-201ENST00000384269 107 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 RNU6-692P-201ENST00000384496 107 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 RNU6-174P-201ENST00000410406 106 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.18□□□□□ -1.9
SUMO3P55854 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.18□□□□□ -1.9
SUMO3P55854 RPL21P23-201ENST00000446654 460 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.18□□□□□ -1.9
SUMO3P55854 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.18□□□□□ -1.9
SUMO3P55854 ELOCP24-201ENST00000456370 334 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 SNORA70.18-201ENST00000516696 98 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 SNORA70.19-201ENST00000516717 90 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.18□□□□□ -1.9
SUMO3P55854 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.18□□□□□ -1.9
SUMO3P55854 AC090897.2-201ENST00000581715 130 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 AC096772.1-201ENST00000609146 564 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 AC133104.2-201ENST00000615272 193 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 AL160413.1-201ENST00000622780 310 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.18□□□□□ -1.9
SUMO3P55854 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.18□□□□□ -1.9
SUMO3P55854 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SUMO3P55854 AL049781.1-201ENST00000623195 3585 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 AC099654.7-201ENST00000635788 2127 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
SUMO3P55854 AC058791.1-201ENST00000608412 3198 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.17□□□□□ -1.9
SUMO3P55854 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.17□□□□□ -1.9
SUMO3P55854 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.17□□□□□ -1.9
SUMO3P55854 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SUMO3P55854 RNU6-1059P-201ENST00000363752 98 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 MIR200C-201ENST00000384980 68 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 BTF3L4P2-201ENST00000392798 346 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 AL591034.2-201ENST00000402839 359 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 Z98941.1-201ENST00000407764 100 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 RNU6-1304P-201ENST00000411374 106 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.17□□□□□ -1.9
SUMO3P55854 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.17□□□□□ -1.9
SUMO3P55854 MTND3P9-201ENST00000429526 346 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 HMGN2P31-201ENST00000432430 273 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.17□□□□□ -1.9
SUMO3P55854 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.17□□□□□ -1.9
SUMO3P55854 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.17□□□□□ -1.9
SUMO3P55854 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.17□□□□□ -1.9
SUMO3P55854 AC097473.1-201ENST00000508142 408 ntBASIC3.17□□□□□ -1.9
SUMO3P55854 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.17□□□□□ -1.9
SUMO3P55854 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 233.9 ms