Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.06□□□□□ -2.08
LIM2P55344 MTND4P32-201ENST00000437189 1237 ntBASIC2.06□□□□□ -2.08
LIM2P55344 MTCO1P19-201ENST00000443487 500 ntBASIC2.06□□□□□ -2.08
LIM2P55344 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.06□□□□□ -2.08
LIM2P55344 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AC073901.1-201ENST00000462471 408 ntBASIC2.06□□□□□ -2.08
LIM2P55344 MED28P2-201ENST00000475771 317 ntBASIC2.06□□□□□ -2.08
LIM2P55344 HMGB1P29-201ENST00000505659 499 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.06□□□□□ -2.08
LIM2P55344 AC008549.1-201ENST00000512900 643 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AC105417.1-201ENST00000514691 285 ntBASIC2.06□□□□□ -2.08
LIM2P55344 LRRC34P2-201ENST00000514850 553 ntBASIC2.06□□□□□ -2.08
LIM2P55344 MIR892C-201ENST00000516410 77 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AC010186.2-204ENST00000537668 439 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.06□□□□□ -2.08
LIM2P55344 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.06□□□□□ -2.08
LIM2P55344 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.06□□□□□ -2.08
LIM2P55344 LRRC37A5P-203ENST00000580181 585 ntBASIC2.06□□□□□ -2.08
LIM2P55344 MIR3199-1-201ENST00000582434 88 ntBASIC2.06□□□□□ -2.08
LIM2P55344 DEFB131E-202ENST00000602581 683 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AC078795.2-201ENST00000602835 1252 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AC008945.2-201ENST00000606056 604 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.06□□□□□ -2.08
LIM2P55344 AC091834.1-201ENST00000614543 472 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AC010378.1-201ENST00000619270 362 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AP003400.5-201ENST00000624827 617 ntBASIC2.06□□□□□ -2.08
LIM2P55344 AC090582.1-201ENST00000636321 199 ntBASIC2.06□□□□□ -2.08
LIM2P55344 HSPA8P4-201ENST00000511877 1920 ntBASIC2.06□□□□□ -2.08
LIM2P55344 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
LIM2P55344 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LIM2P55344 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.05□□□□□ -2.08
LIM2P55344 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LIM2P55344 SNORD3E-201ENST00000362899 217 ntBASIC2.05□□□□□ -2.08
LIM2P55344 RNU6-942P-201ENST00000363002 107 ntBASIC2.05□□□□□ -2.08
LIM2P55344 SNORD116-1-201ENST00000384335 95 ntBASIC2.05□□□□□ -2.08
LIM2P55344 RNU6-843P-201ENST00000384454 104 ntBASIC2.05□□□□□ -2.08
LIM2P55344 MIR1-2-201ENST00000384961 85 ntBASIC2.05□□□□□ -2.08
LIM2P55344 SNORA48.3-201ENST00000391081 134 ntBASIC2.05□□□□□ -2.08
LIM2P55344 FTH1P15-201ENST00000406984 280 ntBASIC2.05□□□□□ -2.08
LIM2P55344 RNU6-607P-201ENST00000411283 108 ntBASIC2.05□□□□□ -2.08
LIM2P55344 AL135786.1-201ENST00000415892 214 ntBASIC2.05□□□□□ -2.08
LIM2P55344 AC016831.2-201ENST00000417179 352 ntBASIC2.05□□□□□ -2.08
LIM2P55344 USP9YP27-201ENST00000418455 438 ntBASIC2.05□□□□□ -2.08
LIM2P55344 AC097463.2-201ENST00000421074 142 ntBASIC2.05□□□□□ -2.08
LIM2P55344 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.05□□□□□ -2.08
LIM2P55344 TOMM20P4-201ENST00000427861 435 ntBASIC2.05□□□□□ -2.08
LIM2P55344 RPL30P4-201ENST00000429309 333 ntBASIC2.05□□□□□ -2.08
LIM2P55344 WARS2P1-201ENST00000429678 537 ntBASIC2.05□□□□□ -2.08
LIM2P55344 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.05□□□□□ -2.08
LIM2P55344 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.05□□□□□ -2.08
LIM2P55344 MTCO2P16-201ENST00000436962 677 ntBASIC2.05□□□□□ -2.08
LIM2P55344 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.05□□□□□ -2.08
LIM2P55344 AL360221.1-201ENST00000445989 335 ntBASIC2.05□□□□□ -2.08
LIM2P55344 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.05□□□□□ -2.08
LIM2P55344 RNU7-26P-201ENST00000458980 63 ntBASIC2.05□□□□□ -2.08
LIM2P55344 AL121769.1-201ENST00000469473 401 ntBASIC2.05□□□□□ -2.08
LIM2P55344 AC079140.3-201ENST00000511111 550 ntBASIC2.05□□□□□ -2.08
LIM2P55344 SCARNA16.3-201ENST00000516595 184 ntBASIC2.05□□□□□ -2.08
LIM2P55344 AC109329.1-201ENST00000518744 317 ntBASIC2.05□□□□□ -2.08
LIM2P55344 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.05□□□□□ -2.08
LIM2P55344 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.05□□□□□ -2.08
LIM2P55344 AGGF1P4-201ENST00000568249 801 ntBASIC2.05□□□□□ -2.08
LIM2P55344 MIR3941-201ENST00000582572 103 ntBASIC2.05□□□□□ -2.08
LIM2P55344 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.05□□□□□ -2.08
LIM2P55344 AC073648.5-201ENST00000603502 305 ntBASIC2.05□□□□□ -2.08
LIM2P55344 AL049779.4-201ENST00000604500 156 ntBASIC2.05□□□□□ -2.08
LIM2P55344 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.05□□□□□ -2.08
LIM2P55344 HMGB1P24-202ENST00000615653 685 ntBASIC2.05□□□□□ -2.08
LIM2P55344 MIR6873-201ENST00000622788 63 ntBASIC2.05□□□□□ -2.08
LIM2P55344 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.05□□□□□ -2.08
LIM2P55344 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
LIM2P55344 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LIM2P55344 RNU6-384P-201ENST00000364900 104 ntBASIC2.04□□□□□ -2.08
LIM2P55344 SNORD116-2-201ENST00000384274 95 ntBASIC2.04□□□□□ -2.08
LIM2P55344 SNORD116-6-201ENST00000384711 96 ntBASIC2.04□□□□□ -2.08
LIM2P55344 Y_RNA.582-201ENST00000391023 95 ntBASIC2.04□□□□□ -2.08
LIM2P55344 RNA5SP425-201ENST00000410336 112 ntBASIC2.04□□□□□ -2.08
LIM2P55344 RNU2-29P-201ENST00000410423 189 ntBASIC2.04□□□□□ -2.08
LIM2P55344 MTATP6P18-201ENST00000417994 673 ntBASIC2.04□□□□□ -2.08
LIM2P55344 AC003685.2-201ENST00000422795 395 ntBASIC2.04□□□□□ -2.08
LIM2P55344 MTCO3P30-201ENST00000426425 670 ntBASIC2.04□□□□□ -2.08
LIM2P55344 Z98742.2-201ENST00000431564 187 ntBASIC2.04□□□□□ -2.08
LIM2P55344 AL365400.1-201ENST00000431854 640 ntBASIC2.04□□□□□ -2.08
LIM2P55344 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.04□□□□□ -2.08
LIM2P55344 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.04□□□□□ -2.08
LIM2P55344 MTCO2P18-201ENST00000457151 658 ntBASIC2.04□□□□□ -2.08
LIM2P55344 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LIM2P55344 RPL36AP48-201ENST00000485521 314 ntBASIC2.04□□□□□ -2.08
LIM2P55344 AC079382.1-201ENST00000493346 557 ntBASIC2.04□□□□□ -2.08
LIM2P55344 AC008526.1-201ENST00000509149 338 ntBASIC2.04□□□□□ -2.08
LIM2P55344 AC091133.4-201ENST00000511142 308 ntBASIC2.04□□□□□ -2.08
LIM2P55344 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.04□□□□□ -2.08
LIM2P55344 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LIM2P55344 AC091544.4-201ENST00000555268 342 ntBASIC2.04□□□□□ -2.08
LIM2P55344 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.04□□□□□ -2.08
LIM2P55344 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.04□□□□□ -2.08
LIM2P55344 SUB1P2-201ENST00000556401 297 ntBASIC2.04□□□□□ -2.08
LIM2P55344 MIR1273D-201ENST00000577266 86 ntBASIC2.04□□□□□ -2.08
LIM2P55344 MIR4703-201ENST00000577728 79 ntBASIC2.04□□□□□ -2.08
LIM2P55344 MIR5571-201ENST00000577998 113 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms