Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RNU6-486P-201ENST00000363116 107 ntBASIC2.6□□□□□ -1.99
CDH13P55290 SNORA25.6-201ENST00000364121 118 ntBASIC2.6□□□□□ -1.99
CDH13P55290 SNORD56.5-201ENST00000364281 72 ntBASIC2.6□□□□□ -1.99
CDH13P55290 RNU6-1303P-201ENST00000364841 107 ntBASIC2.6□□□□□ -1.99
CDH13P55290 RNU1-140P-201ENST00000365040 165 ntBASIC2.6□□□□□ -1.99
CDH13P55290 Y_RNA.516-201ENST00000384541 124 ntBASIC2.6□□□□□ -1.99
CDH13P55290 SNORA44-201ENST00000384584 132 ntBASIC2.6□□□□□ -1.99
CDH13P55290 SNORD37.1-201ENST00000390968 65 ntBASIC2.6□□□□□ -1.99
CDH13P55290 OR9R1P-201ENST00000412200 877 ntBASIC2.6□□□□□ -1.99
CDH13P55290 BX682237.1-201ENST00000415016 335 ntBASIC2.6□□□□□ -1.99
CDH13P55290 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.6□□□□□ -1.99
CDH13P55290 AL135938.1-201ENST00000443141 297 ntBASIC2.6□□□□□ -1.99
CDH13P55290 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH13P55290 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH13P55290 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.6□□□□□ -1.99
CDH13P55290 RNA5SP401-201ENST00000515920 127 ntBASIC2.6□□□□□ -1.99
CDH13P55290 RNU6-1281P-201ENST00000516223 105 ntBASIC2.6□□□□□ -1.99
CDH13P55290 SNORD60.2-201ENST00000516883 86 ntBASIC2.6□□□□□ -1.99
CDH13P55290 SCARNA3-201ENST00000517097 143 ntBASIC2.6□□□□□ -1.99
CDH13P55290 RN7SKP40-201ENST00000517211 242 ntBASIC2.6□□□□□ -1.99
CDH13P55290 AC079598.5-201ENST00000547460 117 ntBASIC2.6□□□□□ -1.99
CDH13P55290 OR11H5P-201ENST00000554039 926 ntBASIC2.6□□□□□ -1.99
CDH13P55290 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.6□□□□□ -1.99
CDH13P55290 TPRKBP2-201ENST00000565969 475 ntBASIC2.6□□□□□ -1.99
CDH13P55290 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH13P55290 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.6□□□□□ -1.99
CDH13P55290 MIR5583-1-201ENST00000580941 59 ntBASIC2.6□□□□□ -1.99
CDH13P55290 AC008121.1-201ENST00000603244 268 ntBASIC2.6□□□□□ -1.99
CDH13P55290 AC096772.1-201ENST00000609146 564 ntBASIC2.6□□□□□ -1.99
CDH13P55290 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CDH13P55290 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDH13P55290 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDH13P55290 AC080128.1-201ENST00000474389 1917 ntBASIC2.6□□□□□ -1.99
CDH13P55290 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CDH13P55290 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.59□□□□□ -1.99
CDH13P55290 RNU5E-7P-201ENST00000365290 117 ntBASIC2.59□□□□□ -1.99
CDH13P55290 RNU6-483P-201ENST00000384088 108 ntBASIC2.59□□□□□ -1.99
CDH13P55290 RNU6-780P-201ENST00000391030 104 ntBASIC2.59□□□□□ -1.99
CDH13P55290 AL139095.1-201ENST00000404326 391 ntBASIC2.59□□□□□ -1.99
CDH13P55290 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH13P55290 AL096701.2-201ENST00000416920 238 ntBASIC2.59□□□□□ -1.99
CDH13P55290 ARL5AP1-201ENST00000418991 388 ntBASIC2.59□□□□□ -1.99
CDH13P55290 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH13P55290 AC087499.2-201ENST00000432861 149 ntBASIC2.59□□□□□ -1.99
CDH13P55290 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH13P55290 AL445687.1-201ENST00000439946 251 ntBASIC2.59□□□□□ -1.99
CDH13P55290 S100A11P2-201ENST00000467589 312 ntBASIC2.59□□□□□ -1.99
CDH13P55290 AL121769.1-201ENST00000469473 401 ntBASIC2.59□□□□□ -1.99
CDH13P55290 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.59□□□□□ -1.99
CDH13P55290 CCDC34P1-201ENST00000507441 517 ntBASIC2.59□□□□□ -1.99
CDH13P55290 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH13P55290 AC069113.1-201ENST00000517763 267 ntBASIC2.59□□□□□ -1.99
CDH13P55290 CYCSP27-201ENST00000527643 293 ntBASIC2.59□□□□□ -1.99
CDH13P55290 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.59□□□□□ -1.99
CDH13P55290 AK6P1-201ENST00000540219 478 ntBASIC2.59□□□□□ -1.99
CDH13P55290 AC023050.3-201ENST00000541142 333 ntBASIC2.59□□□□□ -1.99
CDH13P55290 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH13P55290 AC090115.3-201ENST00000553218 849 ntBASIC2.59□□□□□ -1.99
CDH13P55290 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH13P55290 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH13P55290 MIR3117-201ENST00000584034 78 ntBASIC2.59□□□□□ -1.99
CDH13P55290 AL356280.1-201ENST00000603614 379 ntBASIC2.59□□□□□ -1.99
CDH13P55290 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CDH13P55290 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH13P55290 AC068137.3-201ENST00000639191 341 ntBASIC2.59□□□□□ -1.99
CDH13P55290 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.59□□□□□ -1.99
CDH13P55290 MTND4P27-201ENST00000450813 1354 ntBASIC2.59□□□□□ -2
CDH13P55290 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.58□□□□□ -2
CDH13P55290 Y_RNA.6-201ENST00000362350 114 ntBASIC2.58□□□□□ -2
CDH13P55290 Y_RNA.9-201ENST00000362354 101 ntBASIC2.58□□□□□ -2
CDH13P55290 VTRNA1-1-201ENST00000363120 99 ntBASIC2.58□□□□□ -2
CDH13P55290 RNU6-38P-201ENST00000384085 107 ntBASIC2.58□□□□□ -2
CDH13P55290 SNORD116-20-201ENST00000384529 92 ntBASIC2.58□□□□□ -2
CDH13P55290 MIR483-201ENST00000385070 76 ntBASIC2.58□□□□□ -2
CDH13P55290 AL356057.3-201ENST00000402607 340 ntBASIC2.58□□□□□ -2
CDH13P55290 U6atac.2-201ENST00000408644 118 ntBASIC2.58□□□□□ -2
CDH13P55290 RNU6-908P-201ENST00000410160 94 ntBASIC2.58□□□□□ -2
CDH13P55290 Z98742.2-201ENST00000431564 187 ntBASIC2.58□□□□□ -2
CDH13P55290 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.58□□□□□ -2
CDH13P55290 HMGB1P31-201ENST00000437242 427 ntBASIC2.58□□□□□ -2
CDH13P55290 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.58□□□□□ -2
CDH13P55290 AC012308.1-201ENST00000451232 178 ntBASIC2.58□□□□□ -2
CDH13P55290 RNU6-333P-201ENST00000459117 107 ntBASIC2.58□□□□□ -2
CDH13P55290 AC080013.2-201ENST00000460866 323 ntBASIC2.58□□□□□ -2
CDH13P55290 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.58□□□□□ -2
CDH13P55290 DYNLL1P5-201ENST00000467158 270 ntBASIC2.58□□□□□ -2
CDH13P55290 MTCO3P38-201ENST00000468910 766 ntBASIC2.58□□□□□ -2
CDH13P55290 RPL36AP48-201ENST00000485521 314 ntBASIC2.58□□□□□ -2
CDH13P55290 AC082651.2-201ENST00000496833 166 ntBASIC2.58□□□□□ -2
CDH13P55290 RPL38P4-201ENST00000502376 214 ntBASIC2.58□□□□□ -2
CDH13P55290 MTCYBP40-201ENST00000509390 1135 ntBASIC2.58□□□□□ -2
CDH13P55290 TBCAP3-201ENST00000512475 312 ntBASIC2.58□□□□□ -2
CDH13P55290 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.58□□□□□ -2
CDH13P55290 AC109479.2-201ENST00000517842 174 ntBASIC2.58□□□□□ -2
CDH13P55290 CENPUP1-201ENST00000526649 1202 ntBASIC2.58□□□□□ -2
CDH13P55290 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.58□□□□□ -2
CDH13P55290 AC090616.3-201ENST00000582184 217 ntBASIC2.58□□□□□ -2
CDH13P55290 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.58□□□□□ -2
CDH13P55290 RPS15AP11-201ENST00000594193 385 ntBASIC2.58□□□□□ -2
CDH13P55290 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms