Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC026801.1-201ENST00000497178 464 ntBASIC3.34□□□□□ -1.87
COPAP53621 RNA5SP454-201ENST00000517231 127 ntBASIC3.34□□□□□ -1.87
COPAP53621 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.34□□□□□ -1.87
COPAP53621 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.34□□□□□ -1.87
COPAP53621 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.34□□□□□ -1.87
COPAP53621 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.34□□□□□ -1.87
COPAP53621 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.34□□□□□ -1.87
COPAP53621 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.34□□□□□ -1.87
COPAP53621 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.34□□□□□ -1.87
COPAP53621 AC138761.3-201ENST00000579993 334 ntBASIC3.34□□□□□ -1.87
COPAP53621 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.34□□□□□ -1.87
COPAP53621 AC020895.1-201ENST00000595362 272 ntBASIC3.34□□□□□ -1.87
COPAP53621 APOOP1-201ENST00000604695 592 ntBASIC3.34□□□□□ -1.87
COPAP53621 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COPAP53621 AL138726.1-201ENST00000614873 333 ntBASIC3.34□□□□□ -1.87
COPAP53621 AC022140.2-201ENST00000623500 188 ntBASIC3.34□□□□□ -1.87
COPAP53621 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.34□□□□□ -1.88
COPAP53621 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
COPAP53621 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
COPAP53621 MTND5P27-201ENST00000428871 1720 ntBASIC3.33□□□□□ -1.88
COPAP53621 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COPAP53621 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
COPAP53621 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COPAP53621 AC010680.1-201ENST00000590024 3590 ntBASIC3.33□□□□□ -1.88
COPAP53621 RNU6-562P-201ENST00000362731 107 ntBASIC3.33□□□□□ -1.88
COPAP53621 RNU1-105P-201ENST00000363470 161 ntBASIC3.33□□□□□ -1.88
COPAP53621 RNU6-694P-201ENST00000364071 147 ntBASIC3.33□□□□□ -1.88
COPAP53621 RNU6-898P-201ENST00000365627 104 ntBASIC3.33□□□□□ -1.88
COPAP53621 Z98749.2-208ENST00000381646 500 ntBASIC3.33□□□□□ -1.88
COPAP53621 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COPAP53621 SNORD116-11-201ENST00000383882 92 ntBASIC3.33□□□□□ -1.88
COPAP53621 MIR548F5-201ENST00000408421 86 ntBASIC3.33□□□□□ -1.88
COPAP53621 AC074085.1-201ENST00000413598 418 ntBASIC3.33□□□□□ -1.88
COPAP53621 RPL32P28-201ENST00000443577 397 ntBASIC3.33□□□□□ -1.88
COPAP53621 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.33□□□□□ -1.88
COPAP53621 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.33□□□□□ -1.88
COPAP53621 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.33□□□□□ -1.88
COPAP53621 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.33□□□□□ -1.88
COPAP53621 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.33□□□□□ -1.88
COPAP53621 RNU6-277P-201ENST00000516272 106 ntBASIC3.33□□□□□ -1.88
COPAP53621 COPS8P3-201ENST00000526024 482 ntBASIC3.33□□□□□ -1.88
COPAP53621 AC093027.1-201ENST00000546698 429 ntBASIC3.33□□□□□ -1.88
COPAP53621 AC025423.5-201ENST00000550230 219 ntBASIC3.33□□□□□ -1.88
COPAP53621 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
COPAP53621 AC010653.1-201ENST00000571108 881 ntBASIC3.33□□□□□ -1.88
COPAP53621 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.33□□□□□ -1.88
COPAP53621 AC007151.1-201ENST00000572774 483 ntBASIC3.33□□□□□ -1.88
COPAP53621 OR1M4P-201ENST00000589199 287 ntBASIC3.33□□□□□ -1.88
COPAP53621 AL451007.1-201ENST00000595491 289 ntBASIC3.33□□□□□ -1.88
COPAP53621 AC113139.1-201ENST00000605049 239 ntBASIC3.33□□□□□ -1.88
COPAP53621 AC019159.1-201ENST00000605094 187 ntBASIC3.33□□□□□ -1.88
COPAP53621 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.33□□□□□ -1.88
COPAP53621 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.33□□□□□ -1.88
COPAP53621 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COPAP53621 ADAM3A-203ENST00000461344 2157 ntBASIC3.33□□□□□ -1.88
COPAP53621 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COPAP53621 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.33□□□□□ -1.88
COPAP53621 AC110491.1-201ENST00000562191 2010 ntBASIC3.32□□□□□ -1.88
COPAP53621 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COPAP53621 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.32□□□□□ -1.88
COPAP53621 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.32□□□□□ -1.88
COPAP53621 RNU1-70P-201ENST00000362618 164 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-37P-201ENST00000362692 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-11P-201ENST00000364234 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-7-201ENST00000364784 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-8-201ENST00000365467 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 DYNLT3P1-201ENST00000378574 347 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-25P-201ENST00000383873 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-1-201ENST00000383898 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-48P-201ENST00000384161 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-36P-201ENST00000384172 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-4P-201ENST00000384205 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-5P-201ENST00000384238 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-3P-201ENST00000384314 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-16P-201ENST00000384385 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-15P-201ENST00000384534 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 Y_RNA.535-201ENST00000384612 99 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-2-201ENST00000384627 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-29P-201ENST00000384637 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-9-201ENST00000384776 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-33P-201ENST00000384793 107 ntBASIC3.32□□□□□ -1.88
COPAP53621 MIR634-201ENST00000385208 97 ntBASIC3.32□□□□□ -1.88
COPAP53621 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.32□□□□□ -1.88
COPAP53621 AC016831.2-201ENST00000417179 352 ntBASIC3.32□□□□□ -1.88
COPAP53621 AC098831.1-201ENST00000440661 216 ntBASIC3.32□□□□□ -1.88
COPAP53621 Z96811.1-201ENST00000445880 108 ntBASIC3.32□□□□□ -1.88
COPAP53621 Y_RNA.635-201ENST00000459041 101 ntBASIC3.32□□□□□ -1.88
COPAP53621 AC109925.1-201ENST00000478069 331 ntBASIC3.32□□□□□ -1.88
COPAP53621 AC006445.1-201ENST00000491925 405 ntBASIC3.32□□□□□ -1.88
COPAP53621 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COPAP53621 AC008526.1-201ENST00000509149 338 ntBASIC3.32□□□□□ -1.88
COPAP53621 RAC1P5-201ENST00000512182 576 ntBASIC3.32□□□□□ -1.88
COPAP53621 RNU6-56P-201ENST00000516986 93 ntBASIC3.32□□□□□ -1.88
COPAP53621 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.32□□□□□ -1.88
COPAP53621 AC245166.1-201ENST00000521012 253 ntBASIC3.32□□□□□ -1.88
COPAP53621 AP000889.1-201ENST00000530968 660 ntBASIC3.32□□□□□ -1.88
COPAP53621 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.32□□□□□ -1.88
COPAP53621 GLYCAM1-201ENST00000546596 285 ntBASIC3.32□□□□□ -1.88
COPAP53621 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.32□□□□□ -1.88
COPAP53621 RNU6-6P-201ENST00000606623 107 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms