Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC016831.2-201ENST00000417179 352 ntBASIC1.87□□□□□ -2.11
ACLYP53396 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.87□□□□□ -2.11
ACLYP53396 AL583843.1-201ENST00000456070 346 ntBASIC1.87□□□□□ -2.11
ACLYP53396 MED28P2-201ENST00000475771 317 ntBASIC1.87□□□□□ -2.11
ACLYP53396 AC034114.1-201ENST00000520293 285 ntBASIC1.87□□□□□ -2.11
ACLYP53396 AC107953.1-201ENST00000522216 297 ntBASIC1.87□□□□□ -2.11
ACLYP53396 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.87□□□□□ -2.11
ACLYP53396 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.87□□□□□ -2.11
ACLYP53396 OR5B19P-201ENST00000531766 928 ntBASIC1.87□□□□□ -2.11
ACLYP53396 ZNF519P3-201ENST00000557158 1032 ntBASIC1.87□□□□□ -2.11
ACLYP53396 TMF1P1-201ENST00000576058 373 ntBASIC1.87□□□□□ -2.11
ACLYP53396 MIR4419B-201ENST00000577260 68 ntBASIC1.87□□□□□ -2.11
ACLYP53396 AC103987.3-201ENST00000582071 292 ntBASIC1.87□□□□□ -2.11
ACLYP53396 MIR4999-201ENST00000585029 91 ntBASIC1.87□□□□□ -2.11
ACLYP53396 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ACLYP53396 AC018714.1-201ENST00000605028 208 ntBASIC1.87□□□□□ -2.11
ACLYP53396 NDUFA8P1-201ENST00000605525 367 ntBASIC1.87□□□□□ -2.11
ACLYP53396 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.87□□□□□ -2.11
ACLYP53396 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ACLYP53396 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.86□□□□□ -2.11
ACLYP53396 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ACLYP53396 SNORD114-19-201ENST00000363072 75 ntBASIC1.86□□□□□ -2.11
ACLYP53396 RNU1-23P-201ENST00000363361 144 ntBASIC1.86□□□□□ -2.11
ACLYP53396 Y_RNA.796-201ENST00000364268 102 ntBASIC1.86□□□□□ -2.11
ACLYP53396 Y_RNA.799-201ENST00000364992 102 ntBASIC1.86□□□□□ -2.11
ACLYP53396 AL451074.3-201ENST00000437709 472 ntBASIC1.86□□□□□ -2.11
ACLYP53396 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.86□□□□□ -2.11
ACLYP53396 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.86□□□□□ -2.11
ACLYP53396 AC118469.1-201ENST00000442943 488 ntBASIC1.86□□□□□ -2.11
ACLYP53396 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.86□□□□□ -2.11
ACLYP53396 SNRPGP9-201ENST00000456025 225 ntBASIC1.86□□□□□ -2.11
ACLYP53396 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.86□□□□□ -2.11
ACLYP53396 AC018868.1-201ENST00000491307 315 ntBASIC1.86□□□□□ -2.11
ACLYP53396 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
ACLYP53396 RNU7-51P-201ENST00000516560 62 ntBASIC1.86□□□□□ -2.11
ACLYP53396 Y_RNA.689-201ENST00000516589 107 ntBASIC1.86□□□□□ -2.11
ACLYP53396 MTND4LP18-201ENST00000526864 291 ntBASIC1.86□□□□□ -2.11
ACLYP53396 OR5AQ1P-201ENST00000527596 927 ntBASIC1.86□□□□□ -2.11
ACLYP53396 AP003122.4-201ENST00000530980 758 ntBASIC1.86□□□□□ -2.11
ACLYP53396 CBX3P4-201ENST00000538909 354 ntBASIC1.86□□□□□ -2.11
ACLYP53396 AC092325.1-201ENST00000566449 554 ntBASIC1.86□□□□□ -2.11
ACLYP53396 AL354943.1-201ENST00000572103 781 ntBASIC1.86□□□□□ -2.11
ACLYP53396 MIR4287-201ENST00000579398 78 ntBASIC1.86□□□□□ -2.11
ACLYP53396 MIR3118-1-201ENST00000581787 76 ntBASIC1.86□□□□□ -2.11
ACLYP53396 AC073410.2-201ENST00000603240 332 ntBASIC1.86□□□□□ -2.11
ACLYP53396 AL645939.4-201ENST00000604495 135 ntBASIC1.86□□□□□ -2.11
ACLYP53396 AL022154.1-201ENST00000604698 785 ntBASIC1.86□□□□□ -2.11
ACLYP53396 TUSC7.1-201ENST00000610969 165 ntBASIC1.86□□□□□ -2.11
ACLYP53396 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.86□□□□□ -2.11
ACLYP53396 AC024940.5-201ENST00000622889 474 ntBASIC1.86□□□□□ -2.11
ACLYP53396 AP002782.1-201ENST00000623107 614 ntBASIC1.86□□□□□ -2.11
ACLYP53396 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.86□□□□□ -2.11
ACLYP53396 AC006026.1-201ENST00000444025 1803 ntBASIC1.86□□□□□ -2.11
ACLYP53396 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.86□□□□□ -2.11
ACLYP53396 AL359851.1-201ENST00000569460 4997 ntBASIC1.85□□□□□ -2.11
ACLYP53396 RBBP8P1-201ENST00000449447 1844 ntBASIC1.85□□□□□ -2.11
ACLYP53396 SNORD113-6-201ENST00000363345 75 ntBASIC1.85□□□□□ -2.11
ACLYP53396 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
ACLYP53396 AP000275.1-201ENST00000411943 390 ntBASIC1.85□□□□□ -2.11
ACLYP53396 AC004965.1-201ENST00000413033 213 ntBASIC1.85□□□□□ -2.11
ACLYP53396 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.85□□□□□ -2.11
ACLYP53396 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.85□□□□□ -2.11
ACLYP53396 AL365338.1-201ENST00000422282 858 ntBASIC1.85□□□□□ -2.11
ACLYP53396 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.85□□□□□ -2.11
ACLYP53396 RPL23AP30-201ENST00000432419 501 ntBASIC1.85□□□□□ -2.11
ACLYP53396 AL354941.1-201ENST00000438600 464 ntBASIC1.85□□□□□ -2.11
ACLYP53396 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.85□□□□□ -2.11
ACLYP53396 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.85□□□□□ -2.11
ACLYP53396 RNA5SP233-201ENST00000459153 113 ntBASIC1.85□□□□□ -2.11
ACLYP53396 AC112204.1-201ENST00000502591 103 ntBASIC1.85□□□□□ -2.11
ACLYP53396 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.85□□□□□ -2.11
ACLYP53396 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.85□□□□□ -2.11
ACLYP53396 AC025678.1-201ENST00000567861 338 ntBASIC1.85□□□□□ -2.11
ACLYP53396 SNORD53B-201ENST00000577887 78 ntBASIC1.85□□□□□ -2.11
ACLYP53396 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
ACLYP53396 AC008749.1-201ENST00000597650 306 ntBASIC1.85□□□□□ -2.11
ACLYP53396 RPL30P11-203ENST00000598995 310 ntBASIC1.85□□□□□ -2.11
ACLYP53396 AC093788.1-201ENST00000609356 927 ntBASIC1.85□□□□□ -2.11
ACLYP53396 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
ACLYP53396 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ACLYP53396 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ACLYP53396 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.11
ACLYP53396 AL391987.6-201ENST00000305671 199 ntBASIC1.84□□□□□ -2.11
ACLYP53396 Y_RNA.116-201ENST00000363292 103 ntBASIC1.84□□□□□ -2.11
ACLYP53396 RNU1-42P-201ENST00000364033 160 ntBASIC1.84□□□□□ -2.11
ACLYP53396 U3.13-201ENST00000364804 214 ntBASIC1.84□□□□□ -2.11
ACLYP53396 Y_RNA.327-201ENST00000365201 102 ntBASIC1.84□□□□□ -2.11
ACLYP53396 RNU6-1032P-201ENST00000384100 107 ntBASIC1.84□□□□□ -2.11
ACLYP53396 AC138623.1-201ENST00000418060 216 ntBASIC1.84□□□□□ -2.11
ACLYP53396 AC008267.5-201ENST00000424928 265 ntBASIC1.84□□□□□ -2.11
ACLYP53396 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.84□□□□□ -2.11
ACLYP53396 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ACLYP53396 SNRPFP4-201ENST00000456366 242 ntBASIC1.84□□□□□ -2.11
ACLYP53396 HMGB1P35-201ENST00000503360 598 ntBASIC1.84□□□□□ -2.11
ACLYP53396 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.84□□□□□ -2.11
ACLYP53396 MIR514B-201ENST00000516774 80 ntBASIC1.84□□□□□ -2.11
ACLYP53396 AC135279.1-201ENST00000543493 504 ntBASIC1.84□□□□□ -2.11
ACLYP53396 BNIP3P30-201ENST00000601184 574 ntBASIC1.84□□□□□ -2.11
ACLYP53396 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.84□□□□□ -2.11
ACLYP53396 AL078595.3-201ENST00000623815 1166 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms