Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 RNU6-282P-201ENST00000365357 103 ntBASIC2.32□□□□□ -2.04
SMSP52788 U8.8-201ENST00000365399 135 ntBASIC2.32□□□□□ -2.04
SMSP52788 XGY1-201ENST00000381172 446 ntBASIC2.32□□□□□ -2.04
SMSP52788 SNORA67.4-201ENST00000384688 142 ntBASIC2.32□□□□□ -2.04
SMSP52788 RNU6-606P-201ENST00000384721 111 ntBASIC2.32□□□□□ -2.04
SMSP52788 MIR1-2-201ENST00000384961 85 ntBASIC2.32□□□□□ -2.04
SMSP52788 MIR95-201ENST00000385072 81 ntBASIC2.32□□□□□ -2.04
SMSP52788 RNU6-550P-201ENST00000391057 101 ntBASIC2.32□□□□□ -2.04
SMSP52788 AL356057.3-201ENST00000402607 340 ntBASIC2.32□□□□□ -2.04
SMSP52788 AL162578.1-201ENST00000406202 378 ntBASIC2.32□□□□□ -2.04
SMSP52788 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.32□□□□□ -2.04
SMSP52788 RNU6-607P-201ENST00000411283 108 ntBASIC2.32□□□□□ -2.04
SMSP52788 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.32□□□□□ -2.04
SMSP52788 TOMM20P4-201ENST00000427861 435 ntBASIC2.32□□□□□ -2.04
SMSP52788 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.32□□□□□ -2.04
SMSP52788 AL596276.1-201ENST00000434465 418 ntBASIC2.32□□□□□ -2.04
SMSP52788 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.32□□□□□ -2.04
SMSP52788 AC132479.1-201ENST00000449160 144 ntBASIC2.32□□□□□ -2.04
SMSP52788 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.32□□□□□ -2.04
SMSP52788 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SMSP52788 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SMSP52788 PSMA3P-201ENST00000555485 635 ntBASIC2.32□□□□□ -2.04
SMSP52788 MIR3913-1-201ENST00000577744 102 ntBASIC2.32□□□□□ -2.04
SMSP52788 LRRC37A5P-203ENST00000580181 585 ntBASIC2.32□□□□□ -2.04
SMSP52788 AC040904.1-201ENST00000590850 223 ntBASIC2.32□□□□□ -2.04
SMSP52788 AC021646.1-201ENST00000605469 484 ntBASIC2.32□□□□□ -2.04
SMSP52788 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.32□□□□□ -2.04
SMSP52788 MIR5739-201ENST00000619803 80 ntBASIC2.32□□□□□ -2.04
SMSP52788 RMST_7.1-201ENST00000621935 268 ntBASIC2.32□□□□□ -2.04
SMSP52788 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
SMSP52788 RBBP8P1-201ENST00000449447 1844 ntBASIC2.31□□□□□ -2.04
SMSP52788 RNU6-858P-201ENST00000362436 107 ntBASIC2.31□□□□□ -2.04
SMSP52788 SNORA62.1-201ENST00000364287 154 ntBASIC2.31□□□□□ -2.04
SMSP52788 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SMSP52788 RNU6-622P-201ENST00000384272 103 ntBASIC2.31□□□□□ -2.04
SMSP52788 RNU6-348P-201ENST00000384386 107 ntBASIC2.31□□□□□ -2.04
SMSP52788 MIR27B-201ENST00000385129 97 ntBASIC2.31□□□□□ -2.04
SMSP52788 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.31□□□□□ -2.04
SMSP52788 RNU2-3P-201ENST00000410144 191 ntBASIC2.31□□□□□ -2.04
SMSP52788 RNU4-53P-201ENST00000410828 140 ntBASIC2.31□□□□□ -2.04
SMSP52788 AC000111.3-201ENST00000433478 193 ntBASIC2.31□□□□□ -2.04
SMSP52788 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.31□□□□□ -2.04
SMSP52788 CYP2C59P-201ENST00000457790 269 ntBASIC2.31□□□□□ -2.04
SMSP52788 snoU109.2-201ENST00000459316 135 ntBASIC2.31□□□□□ -2.04
SMSP52788 AC117522.2-201ENST00000510049 657 ntBASIC2.31□□□□□ -2.04
SMSP52788 Y_RNA.687-201ENST00000516558 91 ntBASIC2.31□□□□□ -2.04
SMSP52788 Y_RNA.688-201ENST00000516565 95 ntBASIC2.31□□□□□ -2.04
SMSP52788 RNA5SP82-201ENST00000516707 92 ntBASIC2.31□□□□□ -2.04
SMSP52788 RNU6-430P-201ENST00000517078 107 ntBASIC2.31□□□□□ -2.04
SMSP52788 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.31□□□□□ -2.04
SMSP52788 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.31□□□□□ -2.04
SMSP52788 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.31□□□□□ -2.04
SMSP52788 AC009063.1-201ENST00000563342 702 ntBASIC2.31□□□□□ -2.04
SMSP52788 AC009127.3-201ENST00000570531 403 ntBASIC2.31□□□□□ -2.04
SMSP52788 MIR4528-201ENST00000577763 90 ntBASIC2.31□□□□□ -2.04
SMSP52788 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.31□□□□□ -2.04
SMSP52788 AC073539.2-201ENST00000597113 165 ntBASIC2.31□□□□□ -2.04
SMSP52788 BNIP3P30-201ENST00000601184 574 ntBASIC2.31□□□□□ -2.04
SMSP52788 AL138963.2-201ENST00000605137 226 ntBASIC2.31□□□□□ -2.04
SMSP52788 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.31□□□□□ -2.04
SMSP52788 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.31□□□□□ -2.04
SMSP52788 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.31□□□□□ -2.04
SMSP52788 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SMSP52788 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SMSP52788 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SMSP52788 RNU6-1287P-201ENST00000362914 107 ntBASIC2.3□□□□□ -2.04
SMSP52788 RNA5SP240-201ENST00000365355 128 ntBASIC2.3□□□□□ -2.04
SMSP52788 SNORA75-201ENST00000384158 137 ntBASIC2.3□□□□□ -2.04
SMSP52788 RNU6-1060P-201ENST00000384664 107 ntBASIC2.3□□□□□ -2.04
SMSP52788 AL133475.1-201ENST00000404414 305 ntBASIC2.3□□□□□ -2.04
SMSP52788 SNORA3.2-201ENST00000408221 125 ntBASIC2.3□□□□□ -2.04
SMSP52788 RNA5SP390-201ENST00000410191 113 ntBASIC2.3□□□□□ -2.04
SMSP52788 RNU2-63P-201ENST00000410792 194 ntBASIC2.3□□□□□ -2.04
SMSP52788 RNU4-46P-201ENST00000410818 138 ntBASIC2.3□□□□□ -2.04
SMSP52788 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.3□□□□□ -2.04
SMSP52788 AL365400.1-201ENST00000431854 640 ntBASIC2.3□□□□□ -2.04
SMSP52788 AL353705.4-201ENST00000449661 238 ntBASIC2.3□□□□□ -2.04
SMSP52788 C1DP4-201ENST00000455429 424 ntBASIC2.3□□□□□ -2.04
SMSP52788 AP001025.1-201ENST00000486139 332 ntBASIC2.3□□□□□ -2.04
SMSP52788 SNORA43.2-201ENST00000516652 128 ntBASIC2.3□□□□□ -2.04
SMSP52788 RNA5SP503-201ENST00000517047 117 ntBASIC2.3□□□□□ -2.04
SMSP52788 SNORA31.23-201ENST00000517219 133 ntBASIC2.3□□□□□ -2.04
SMSP52788 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.3□□□□□ -2.04
SMSP52788 AL356057.1-201ENST00000533798 831 ntBASIC2.3□□□□□ -2.04
SMSP52788 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.3□□□□□ -2.04
SMSP52788 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.3□□□□□ -2.04
SMSP52788 AC110760.3-201ENST00000598794 467 ntBASIC2.3□□□□□ -2.04
SMSP52788 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.3□□□□□ -2.04
SMSP52788 AC008945.2-201ENST00000606056 604 ntBASIC2.3□□□□□ -2.04
SMSP52788 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.3□□□□□ -2.04
SMSP52788 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.3□□□□□ -2.04
SMSP52788 AL390237.1-201ENST00000404226 1415 ntBASIC2.3□□□□□ -2.04
SMSP52788 ELL2P3-201ENST00000457883 1602 ntBASIC2.3□□□□□ -2.04
SMSP52788 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SMSP52788 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
SMSP52788 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SMSP52788 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SMSP52788 RNU6-116P-201ENST00000384042 109 ntBASIC2.29□□□□□ -2.04
SMSP52788 RNU6-45P-201ENST00000384471 107 ntBASIC2.29□□□□□ -2.04
SMSP52788 RNU1-57P-201ENST00000384491 166 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms