Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.67□□□□□ -2.3
GTF2A1P52655 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.67□□□□□ -2.3
GTF2A1P52655 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.67□□□□□ -2.3
GTF2A1P52655 AC044913.1-201ENST00000557200 430 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 MIR3169-201ENST00000578032 83 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.67□□□□□ -2.3
GTF2A1P52655 AL022345.2-201ENST00000606307 135 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 AC130454.1-201ENST00000622948 401 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 AC095038.3-201ENST00000634439 195 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 FARSBP1-201ENST00000435808 1778 ntBASIC0.67□□□□□ -2.3
GTF2A1P52655 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
GTF2A1P52655 RNU6-1010P-201ENST00000362757 107 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 AC083799.1-201ENST00000366451 910 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.66□□□□□ -2.3
GTF2A1P52655 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.66□□□□□ -2.3
GTF2A1P52655 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.66□□□□□ -2.3
GTF2A1P52655 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.66□□□□□ -2.3
GTF2A1P52655 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.66□□□□□ -2.3
GTF2A1P52655 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.66□□□□□ -2.3
GTF2A1P52655 UBE2V1P8-201ENST00000437166 265 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 MTND2P4-201ENST00000445034 1004 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 FDX1P2-201ENST00000450769 375 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 OR2AQ1P-201ENST00000451972 200 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.66□□□□□ -2.3
GTF2A1P52655 RPS3AP22-201ENST00000488297 769 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.66□□□□□ -2.3
GTF2A1P52655 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.66□□□□□ -2.3
GTF2A1P52655 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.66□□□□□ -2.3
GTF2A1P52655 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.66□□□□□ -2.3
GTF2A1P52655 AL353997.4-201ENST00000586196 166 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 AC090330.1-201ENST00000588646 764 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 VN1R107P-201ENST00000601784 209 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 KATNBL1P5-201ENST00000605015 517 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 AC093788.1-201ENST00000609356 927 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 AL133445.2-201ENST00000611191 527 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 AC090970.3-201ENST00000612566 866 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 AC016911.1-201ENST00000613297 452 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 AC022513.1-201ENST00000624512 117 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 OR4G3P-201ENST00000633500 913 ntBASIC0.66□□□□□ -2.3
GTF2A1P52655 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
GTF2A1P52655 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.65□□□□□ -2.31
GTF2A1P52655 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.65□□□□□ -2.31
GTF2A1P52655 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
GTF2A1P52655 RNU6-952P-201ENST00000391164 108 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 AL117342.1-201ENST00000404861 406 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 CYCSP33-201ENST00000414485 327 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 AL161935.2-201ENST00000414627 60 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.65□□□□□ -2.31
GTF2A1P52655 RPL21P111-201ENST00000418453 477 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 AL589872.1-201ENST00000426602 288 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 AL669831.1-202ENST00000428504 417 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.65□□□□□ -2.31
GTF2A1P52655 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.65□□□□□ -2.31
GTF2A1P52655 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.65□□□□□ -2.31
GTF2A1P52655 RPL7P55-201ENST00000450522 746 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 RNU7-136P-201ENST00000458819 69 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.65□□□□□ -2.31
GTF2A1P52655 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.65□□□□□ -2.31
GTF2A1P52655 RNU6-991P-201ENST00000516168 107 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 AP000907.2-201ENST00000530827 353 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 AC018630.3-201ENST00000542637 96 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 MIR4782-201ENST00000577987 79 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 MZT1P2-201ENST00000604387 248 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 AC100814.1-201ENST00000606963 623 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 AL365204.3-201ENST00000612448 685 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 AL590240.4-201ENST00000616908 390 ntBASIC0.65□□□□□ -2.31
GTF2A1P52655 RNU6-792P-201ENST00000363490 107 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 SNORD114-27-201ENST00000363766 70 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 Y_RNA.327-201ENST00000365201 102 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 RNU6-296P-201ENST00000384608 107 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 FTH1P15-201ENST00000406984 280 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.64□□□□□ -2.31
GTF2A1P52655 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.64□□□□□ -2.31
GTF2A1P52655 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.64□□□□□ -2.31
GTF2A1P52655 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
GTF2A1P52655 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
GTF2A1P52655 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.64□□□□□ -2.31
GTF2A1P52655 AC104629.1-201ENST00000494226 508 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 MTCYBP40-201ENST00000509390 1135 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.64□□□□□ -2.31
GTF2A1P52655 RN7SKP265-201ENST00000516448 223 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 AC009902.1-201ENST00000519351 183 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 AP000889.1-201ENST00000530968 660 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 AC023538.1-201ENST00000534576 736 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
GTF2A1P52655 MIR6857-201ENST00000613267 93 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.64□□□□□ -2.31
GTF2A1P52655 AC099654.9-201ENST00000637055 678 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 MTND4P16-201ENST00000466108 1367 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 AC233981.2-201ENST00000611524 1614 ntBASIC0.64□□□□□ -2.31
GTF2A1P52655 RNU6-160P-201ENST00000384591 107 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.63□□□□□ -2.31
GTF2A1P52655 MTCYBP15-201ENST00000433123 1127 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 MTND2P20-201ENST00000440805 661 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 KATNBL1P3-201ENST00000443475 909 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 AC130509.1-201ENST00000464158 433 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 AL163540.1-201ENST00000485382 386 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms