Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
GDNFP39905 AC100821.1-201ENST00000523153 2479 ntBASIC3.82□□□□□ -1.8
GDNFP39905 AL359693.1-201ENST00000614959 2407 ntBASIC3.82□□□□□ -1.8
GDNFP39905 ZNF204P-201ENST00000416749 2397 ntBASIC3.82□□□□□ -1.8
GDNFP39905 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GDNFP39905 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
GDNFP39905 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDNFP39905 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDNFP39905 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDNFP39905 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDNFP39905 RNU6-818P-201ENST00000364837 108 ntBASIC3.81□□□□□ -1.8
GDNFP39905 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.81□□□□□ -1.8
GDNFP39905 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GDNFP39905 RNU6-741P-201ENST00000383889 107 ntBASIC3.81□□□□□ -1.8
GDNFP39905 RNU6-211P-201ENST00000384047 107 ntBASIC3.81□□□□□ -1.8
GDNFP39905 SNORD20-201ENST00000384550 80 ntBASIC3.81□□□□□ -1.8
GDNFP39905 RNU6-159P-201ENST00000391080 106 ntBASIC3.81□□□□□ -1.8
GDNFP39905 Z98745.1-201ENST00000402553 494 ntBASIC3.81□□□□□ -1.8
GDNFP39905 MIR1911-201ENST00000410783 80 ntBASIC3.81□□□□□ -1.8
GDNFP39905 Y_RNA.629-201ENST00000411368 105 ntBASIC3.81□□□□□ -1.8
GDNFP39905 AC016831.4-201ENST00000438302 307 ntBASIC3.81□□□□□ -1.8
GDNFP39905 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.81□□□□□ -1.8
GDNFP39905 AC006466.1-201ENST00000438721 289 ntBASIC3.81□□□□□ -1.8
GDNFP39905 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.81□□□□□ -1.8
GDNFP39905 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.81□□□□□ -1.8
GDNFP39905 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDNFP39905 RNA5SP291-201ENST00000517222 105 ntBASIC3.81□□□□□ -1.8
GDNFP39905 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.81□□□□□ -1.8
GDNFP39905 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.81□□□□□ -1.8
GDNFP39905 MIR5692C2-201ENST00000577959 77 ntBASIC3.81□□□□□ -1.8
GDNFP39905 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.81□□□□□ -1.8
GDNFP39905 AC024153.1-201ENST00000603103 365 ntBASIC3.81□□□□□ -1.8
GDNFP39905 Mico1.1-201ENST00000611698 204 ntBASIC3.81□□□□□ -1.8
GDNFP39905 AC004825.2-201ENST00000616634 455 ntBASIC3.81□□□□□ -1.8
GDNFP39905 snoU18.1-201ENST00000629629 71 ntBASIC3.81□□□□□ -1.8
GDNFP39905 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDNFP39905 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GDNFP39905 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDNFP39905 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GDNFP39905 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GDNFP39905 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
GDNFP39905 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDNFP39905 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GDNFP39905 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GDNFP39905 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
GDNFP39905 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.8□□□□□ -1.8
GDNFP39905 RNU5B-2P-201ENST00000363036 113 ntBASIC3.8□□□□□ -1.8
GDNFP39905 Y_RNA.215-201ENST00000364204 112 ntBASIC3.8□□□□□ -1.8
GDNFP39905 AL357075.1-201ENST00000404107 726 ntBASIC3.8□□□□□ -1.8
GDNFP39905 RNA5SP239-201ENST00000410218 129 ntBASIC3.8□□□□□ -1.8
GDNFP39905 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.8□□□□□ -1.8
GDNFP39905 AC244098.2-201ENST00000422068 99 ntBASIC3.8□□□□□ -1.8
GDNFP39905 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.8□□□□□ -1.8
GDNFP39905 FTH1P6-201ENST00000430768 320 ntBASIC3.8□□□□□ -1.8
GDNFP39905 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.8□□□□□ -1.8
GDNFP39905 RN7SL585P-201ENST00000470538 280 ntBASIC3.8□□□□□ -1.8
GDNFP39905 RPS4XP22-201ENST00000480755 780 ntBASIC3.8□□□□□ -1.8
GDNFP39905 AC146944.2-203ENST00000502493 354 ntBASIC3.8□□□□□ -1.8
GDNFP39905 AC025554.1-201ENST00000505641 188 ntBASIC3.8□□□□□ -1.8
GDNFP39905 AC139495.1-202ENST00000513164 354 ntBASIC3.8□□□□□ -1.8
GDNFP39905 RNU6-426P-201ENST00000516464 97 ntBASIC3.8□□□□□ -1.8
GDNFP39905 RNU6-966P-201ENST00000516479 104 ntBASIC3.8□□□□□ -1.8
GDNFP39905 RNU6-58P-201ENST00000517143 103 ntBASIC3.8□□□□□ -1.8
GDNFP39905 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.8□□□□□ -1.8
GDNFP39905 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.8□□□□□ -1.8
GDNFP39905 CYCSP39-201ENST00000565821 309 ntBASIC3.8□□□□□ -1.8
GDNFP39905 AC055872.1-201ENST00000570978 278 ntBASIC3.8□□□□□ -1.8
GDNFP39905 AC053481.4-201ENST00000583164 216 ntBASIC3.8□□□□□ -1.8
GDNFP39905 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.8□□□□□ -1.8
GDNFP39905 AL590392.1-201ENST00000604960 446 ntBASIC3.8□□□□□ -1.8
GDNFP39905 AL357075.2-201ENST00000614906 189 ntBASIC3.8□□□□□ -1.8
GDNFP39905 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.8□□□□□ -1.8
GDNFP39905 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.8□□□□□ -1.8
GDNFP39905 U3.53-201ENST00000628922 216 ntBASIC3.8□□□□□ -1.8
GDNFP39905 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GDNFP39905 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GDNFP39905 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
GDNFP39905 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
GDNFP39905 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
GDNFP39905 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
GDNFP39905 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GDNFP39905 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.79□□□□□ -1.8
GDNFP39905 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.79□□□□□ -1.8
GDNFP39905 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GDNFP39905 AC021146.4-201ENST00000309229 279 ntBASIC3.79□□□□□ -1.8
GDNFP39905 RNU4-80P-201ENST00000363200 141 ntBASIC3.79□□□□□ -1.8
GDNFP39905 RNA5SP197-201ENST00000363357 119 ntBASIC3.79□□□□□ -1.8
GDNFP39905 RN7SKP103-201ENST00000363848 320 ntBASIC3.79□□□□□ -1.8
GDNFP39905 SNORD32A-201ENST00000364805 84 ntBASIC3.79□□□□□ -1.8
GDNFP39905 RNU6-213P-201ENST00000384051 104 ntBASIC3.79□□□□□ -1.8
GDNFP39905 RN7SKP267-201ENST00000410381 285 ntBASIC3.79□□□□□ -1.8
GDNFP39905 RNU6-1245P-201ENST00000411130 106 ntBASIC3.79□□□□□ -1.8
GDNFP39905 AL049745.1-201ENST00000433953 286 ntBASIC3.79□□□□□ -1.8
GDNFP39905 SNRPEP9-201ENST00000436794 238 ntBASIC3.79□□□□□ -1.8
GDNFP39905 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.79□□□□□ -1.8
GDNFP39905 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.79□□□□□ -1.8
GDNFP39905 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.79□□□□□ -1.8
GDNFP39905 SNRPGP7-201ENST00000469016 106 ntBASIC3.79□□□□□ -1.8
GDNFP39905 AC020593.1-201ENST00000507399 299 ntBASIC3.79□□□□□ -1.8
GDNFP39905 SNORD116-25-201ENST00000516517 92 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms