Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AC021171.1-201ENST00000603137 706 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 AL138963.2-201ENST00000605137 226 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 AL109620.1-201ENST00000618738 1197 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 AC091965.5-201ENST00000624785 342 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.41□□□□□ -2.18
COL18A1P39060 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.41□□□□□ -2.18
COL18A1P39060 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.41□□□□□ -2.18
COL18A1P39060 AC092125.1-201ENST00000562568 1995 ntBASIC1.41□□□□□ -2.18
COL18A1P39060 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
COL18A1P39060 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
COL18A1P39060 AC138393.1-203ENST00000327086 343 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 RNU6-723P-201ENST00000383973 107 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 RNU6-701P-201ENST00000384059 107 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.4□□□□□ -2.19
COL18A1P39060 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.4□□□□□ -2.19
COL18A1P39060 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.4□□□□□ -2.19
COL18A1P39060 RPL31P63-201ENST00000422565 375 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.4□□□□□ -2.19
COL18A1P39060 AL121601.2-201ENST00000438019 707 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 AL161788.1-201ENST00000441805 169 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
COL18A1P39060 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.4□□□□□ -2.19
COL18A1P39060 KLF3P2-201ENST00000465138 268 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.4□□□□□ -2.19
COL18A1P39060 AC117503.1-201ENST00000472241 394 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.4□□□□□ -2.19
COL18A1P39060 AC139453.3-201ENST00000493276 369 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 RNA5SP384-201ENST00000516615 116 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 SNORA31.16-201ENST00000516773 139 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 RNU6-1183P-201ENST00000517054 60 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.4□□□□□ -2.19
COL18A1P39060 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.4□□□□□ -2.19
COL18A1P39060 RNU6-91P-201ENST00000607774 107 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.4□□□□□ -2.19
COL18A1P39060 AC091932.3-201ENST00000624223 323 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 AP002371.2-201ENST00000624450 503 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 ICE2P2-201ENST00000483823 2787 ntBASIC1.4□□□□□ -2.19
COL18A1P39060 AP000776.1-201ENST00000530032 1663 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 CIR1P3-201ENST00000405137 479 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.39□□□□□ -2.19
COL18A1P39060 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.39□□□□□ -2.19
COL18A1P39060 AL160275.3-201ENST00000423876 471 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC093106.2-201ENST00000428212 385 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.39□□□□□ -2.19
COL18A1P39060 OR6C5P-201ENST00000452388 923 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.39□□□□□ -2.19
COL18A1P39060 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.39□□□□□ -2.19
COL18A1P39060 AL583843.1-201ENST00000456070 346 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC055731.1-201ENST00000474387 401 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.39□□□□□ -2.19
COL18A1P39060 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.39□□□□□ -2.19
COL18A1P39060 AC116655.1-201ENST00000508324 901 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC010587.2-201ENST00000511727 448 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.39□□□□□ -2.19
COL18A1P39060 MIR4287-201ENST00000579398 78 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 MIR4293-201ENST00000584305 78 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.39□□□□□ -2.19
COL18A1P39060 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.39□□□□□ -2.19
COL18A1P39060 AC174048.1-201ENST00000603389 144 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 DPPA3P3-201ENST00000603842 430 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC069431.2-201ENST00000604149 1099 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC034229.4-201ENST00000607861 441 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC092953.2-201ENST00000608000 699 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AL627230.6-201ENST00000611129 280 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC090970.3-201ENST00000612566 866 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 FRG1KP-201ENST00000623592 341 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AL136313.1-201ENST00000624804 202 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.39□□□□□ -2.19
COL18A1P39060 Y_RNA.251-201ENST00000364551 99 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.39□□□□□ -2.19
COL18A1P39060 AL512604.1-201ENST00000404812 257 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 RNU2-62P-201ENST00000410868 191 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 EDDM3CP-201ENST00000415977 425 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 XKRYP1-201ENST00000423438 492 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 RAC1P6-201ENST00000423911 575 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 TXNL1P1-201ENST00000429528 554 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 XKRYP2-201ENST00000432915 492 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.39□□□□□ -2.19
COL18A1P39060 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.39□□□□□ -2.19
COL18A1P39060 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.39□□□□□ -2.19
COL18A1P39060 PMCHL2-203ENST00000457791 237 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 RNU6-953P-201ENST00000459154 107 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 SNORD97-201ENST00000459187 142 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 HMGB3P17-201ENST00000504195 649 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.39□□□□□ -2.19
COL18A1P39060 AC068587.4-201ENST00000533893 186 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.39□□□□□ -2.19
COL18A1P39060 AC090897.2-201ENST00000581715 130 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 MIR4295-201ENST00000585286 85 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AL096840.1-201ENST00000603287 93 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
COL18A1P39060 AL049777.1-201ENST00000622740 518 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 AC099654.8-201ENST00000637757 681 ntBASIC1.39□□□□□ -2.19
COL18A1P39060 RNY4P24-201ENST00000362735 96 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 RNU4-92P-201ENST00000363783 136 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 RNU4-68P-201ENST00000364314 141 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 RNU6-1105P-201ENST00000384774 107 ntBASIC1.38□□□□□ -2.19
COL18A1P39060 SNORA40.19-201ENST00000390846 128 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms