Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 FRG1KP-201ENST00000623592 341 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HOXA9P31269 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HOXA9P31269 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
HOXA9P31269 CENPCP1-201ENST00000533085 2578 ntBASIC1.99□□□□□ -2.09
HOXA9P31269 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.98□□□□□ -2.09
HOXA9P31269 SNORA20.2-201ENST00000383922 131 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 SNORA75-201ENST00000384158 137 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 RNU6-348P-201ENST00000384386 107 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 MIR558-201ENST00000384920 94 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXA9P31269 BX295541.1-201ENST00000417774 250 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXA9P31269 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXA9P31269 RPL36AP53-201ENST00000432891 316 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 AL353706.1-201ENST00000436728 494 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.98□□□□□ -2.09
HOXA9P31269 RPL26P9-201ENST00000457466 433 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 DYNLL1P5-201ENST00000467158 270 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 MTAPP1-201ENST00000489154 819 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXA9P31269 Y_RNA.676-201ENST00000516393 96 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 Y_RNA.689-201ENST00000516589 107 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXA9P31269 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXA9P31269 AC090572.1-201ENST00000519251 160 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 OR5AQ1P-201ENST00000527596 927 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXA9P31269 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXA9P31269 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXA9P31269 AC137800.2-201ENST00000574375 120 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.98□□□□□ -2.09
HOXA9P31269 AC002984.1-201ENST00000591692 448 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 APOOP1-201ENST00000604695 592 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 AC064872.1-201ENST00000604823 1072 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 AC087752.4-201ENST00000605911 462 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 Z99571.1-201ENST00000636677 394 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HOXA9P31269 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXA9P31269 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
HOXA9P31269 FARSBP1-201ENST00000435808 1778 ntBASIC1.98□□□□□ -2.09
HOXA9P31269 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXA9P31269 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXA9P31269 SNORD116-9-201ENST00000384000 95 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 SNORD116-2-201ENST00000384274 95 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 SNORD116-3-201ENST00000384287 95 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 SNORD116-7-201ENST00000384404 95 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 SNORD116-5-201ENST00000384462 95 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 SNORD116-6-201ENST00000384711 96 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 RNU6-750P-201ENST00000390946 107 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 RNU2-49P-201ENST00000410666 184 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 RNU2-8P-201ENST00000410727 190 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXA9P31269 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.97□□□□□ -2.09
HOXA9P31269 MTND3P17-201ENST00000416968 344 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXA9P31269 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.97□□□□□ -2.09
HOXA9P31269 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXA9P31269 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXA9P31269 RPL31P35-201ENST00000431058 377 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 MICF-203ENST00000432679 129 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 MTCO2P16-201ENST00000436962 677 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AC073614.1-201ENST00000438690 650 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AC016691.1-201ENST00000441321 413 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 MTCO1P19-201ENST00000443487 500 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AC244505.5-201ENST00000443639 207 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXA9P31269 AC093899.1-201ENST00000457984 376 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 RNU6-953P-201ENST00000459154 107 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 RPL23AP63-201ENST00000498752 471 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 MIR892C-201ENST00000516410 77 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 Vault.3-201ENST00000516676 95 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 RNU6-914P-201ENST00000516749 109 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 SNORA18.6-201ENST00000516792 115 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AC009902.1-201ENST00000519351 183 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AC025755.1-201ENST00000521306 278 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXA9P31269 MIR4287-201ENST00000579398 78 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.97□□□□□ -2.09
HOXA9P31269 AC008749.1-201ENST00000597650 306 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 BNIP3P9-201ENST00000603714 553 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AL021997.1-201ENST00000605757 193 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AL121992.2-201ENST00000606262 256 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 AC098614.4-201ENST00000607601 462 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HOXA9P31269 HSPA8P4-201ENST00000511877 1920 ntBASIC1.97□□□□□ -2.09
HOXA9P31269 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HOXA9P31269 AC073343.1-201ENST00000328239 651 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 Y_RNA.77-201ENST00000362962 107 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 Y_RNA.140-201ENST00000363474 103 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 SNORA24.1-201ENST00000384401 135 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 MIR9-3-201ENST00000385084 90 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.96□□□□□ -2.1
HOXA9P31269 AC096649.2-201ENST00000416186 393 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 RPL23AP30-201ENST00000432419 501 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 AL591212.2-201ENST00000433923 257 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 MTATP6P16-201ENST00000434543 526 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 RPS24P1-201ENST00000438550 371 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 AC055731.1-201ENST00000474387 401 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms