Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL022067.1-201ENST00000602426 454 ntBASIC0.23□□□□□ -2.37
CLIP1P30622 BBIP1P1-201ENST00000602999 279 ntBASIC0.23□□□□□ -2.37
CLIP1P30622 uc_338.14-201ENST00000613162 166 ntBASIC0.23□□□□□ -2.37
CLIP1P30622 AC018926.3-201ENST00000618841 406 ntBASIC0.23□□□□□ -2.37
CLIP1P30622 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.23□□□□□ -2.37
CLIP1P30622 Z75746.1-201ENST00000440243 2080 ntBASIC0.23□□□□□ -2.37
CLIP1P30622 RNU6-167P-201ENST00000384292 106 ntBASIC0.22□□□□□ -2.37
CLIP1P30622 MIR514A1-201ENST00000385133 98 ntBASIC0.22□□□□□ -2.37
CLIP1P30622 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.22□□□□□ -2.37
CLIP1P30622 Z99497.1-201ENST00000421282 135 ntBASIC0.22□□□□□ -2.37
CLIP1P30622 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.22□□□□□ -2.37
CLIP1P30622 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.22□□□□□ -2.37
CLIP1P30622 MTND5P14-201ENST00000441481 1267 ntBASIC0.22□□□□□ -2.37
CLIP1P30622 COX6CP6-201ENST00000490840 228 ntBASIC0.22□□□□□ -2.37
CLIP1P30622 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.22□□□□□ -2.37
CLIP1P30622 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.22□□□□□ -2.37
CLIP1P30622 AC023050.2-201ENST00000544968 387 ntBASIC0.22□□□□□ -2.37
CLIP1P30622 AC087897.1-201ENST00000550134 156 ntBASIC0.22□□□□□ -2.37
CLIP1P30622 BNIP3P23-201ENST00000599655 511 ntBASIC0.22□□□□□ -2.37
CLIP1P30622 AC092953.2-201ENST00000608000 699 ntBASIC0.22□□□□□ -2.37
CLIP1P30622 RNU6-444P-201ENST00000383988 108 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
CLIP1P30622 MIR888-201ENST00000401186 77 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AL139098.1-201ENST00000407291 389 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 RNU2-43P-201ENST00000410306 190 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AC139712.2-201ENST00000424302 339 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CLIP1P30622 AC074344.1-201ENST00000512823 224 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 SCARNA15.2-201ENST00000516409 127 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AP001893.2-201ENST00000526949 202 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AL713866.2-201ENST00000603579 219 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 HMGB1P51-201ENST00000605166 638 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AP000860.1-201ENST00000605250 559 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AC112220.3-201ENST00000605502 502 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AC135803.1-201ENST00000608748 565 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AC110491.1-201ENST00000562191 2010 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 MIR649-201ENST00000384843 97 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 SNORA48.1-201ENST00000390879 135 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 RNU2-47P-201ENST00000410649 186 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AL022718.1-201ENST00000412004 84 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.21□□□□□ -2.38
CLIP1P30622 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.21□□□□□ -2.38
CLIP1P30622 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.21□□□□□ -2.38
CLIP1P30622 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.21□□□□□ -2.38
CLIP1P30622 MEMO1P3-201ENST00000459811 302 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 SCARNA1-201ENST00000517138 166 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AC018659.1-201ENST00000551083 169 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.21□□□□□ -2.38
CLIP1P30622 NDUFA8P1-201ENST00000605525 367 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AL022345.1-201ENST00000607292 135 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AC009318.4-201ENST00000620496 486 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AL109659.3-201ENST00000624985 950 ntBASIC0.21□□□□□ -2.38
CLIP1P30622 AC092125.1-201ENST00000562568 1995 ntBASIC0.2□□□□□ -2.38
CLIP1P30622 AC023934.1-201ENST00000574529 2389 ntBASIC0.2□□□□□ -2.38
CLIP1P30622 SNORD51-201ENST00000384320 80 ntBASIC0.2□□□□□ -2.38
CLIP1P30622 RNU6-921P-201ENST00000384361 107 ntBASIC0.2□□□□□ -2.38
CLIP1P30622 RNU6-110P-201ENST00000384508 104 ntBASIC0.2□□□□□ -2.38
CLIP1P30622 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.2□□□□□ -2.38
CLIP1P30622 AC098831.1-201ENST00000440661 216 ntBASIC0.2□□□□□ -2.38
CLIP1P30622 AC091152.3-201ENST00000604227 325 ntBASIC0.2□□□□□ -2.38
CLIP1P30622 MZT1P2-201ENST00000604387 248 ntBASIC0.2□□□□□ -2.38
CLIP1P30622 AP005229.2-201ENST00000609980 697 ntBASIC0.2□□□□□ -2.38
CLIP1P30622 U6.107-201ENST00000637108 79 ntBASIC0.2□□□□□ -2.38
CLIP1P30622 RNU6-414P-201ENST00000363705 104 ntBASIC0.19□□□□□ -2.38
CLIP1P30622 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CLIP1P30622 NCOR1P3-201ENST00000420479 303 ntBASIC0.19□□□□□ -2.38
CLIP1P30622 Z95118.1-201ENST00000421372 247 ntBASIC0.19□□□□□ -2.38
CLIP1P30622 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.19□□□□□ -2.38
CLIP1P30622 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.19□□□□□ -2.38
CLIP1P30622 AL512637.2-201ENST00000431287 1256 ntBASIC0.19□□□□□ -2.38
CLIP1P30622 AL358794.1-201ENST00000445689 381 ntBASIC0.19□□□□□ -2.38
CLIP1P30622 AC013267.1-201ENST00000458227 267 ntBASIC0.19□□□□□ -2.38
CLIP1P30622 AC067940.1-201ENST00000458411 300 ntBASIC0.19□□□□□ -2.38
CLIP1P30622 MTND1P16-201ENST00000465177 898 ntBASIC0.19□□□□□ -2.38
CLIP1P30622 AC025459.1-201ENST00000504072 156 ntBASIC0.19□□□□□ -2.38
CLIP1P30622 BOLA3P3-201ENST00000505182 232 ntBASIC0.19□□□□□ -2.38
CLIP1P30622 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CLIP1P30622 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.19□□□□□ -2.38
CLIP1P30622 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CLIP1P30622 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.19□□□□□ -2.38
CLIP1P30622 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.19□□□□□ -2.38
CLIP1P30622 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.19□□□□□ -2.38
CLIP1P30622 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.19□□□□□ -2.38
CLIP1P30622 Y_RNA.549-201ENST00000384657 102 ntBASIC0.18□□□□□ -2.38
CLIP1P30622 AL109755.1-201ENST00000401791 649 ntBASIC0.18□□□□□ -2.38
CLIP1P30622 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.18□□□□□ -2.38
CLIP1P30622 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CLIP1P30622 EIF1P1-201ENST00000421436 341 ntBASIC0.18□□□□□ -2.38
CLIP1P30622 MTCYBP32-201ENST00000427945 1084 ntBASIC0.18□□□□□ -2.38
CLIP1P30622 AC007919.1-201ENST00000429380 217 ntBASIC0.18□□□□□ -2.38
CLIP1P30622 RPL36AP53-201ENST00000432891 316 ntBASIC0.18□□□□□ -2.38
CLIP1P30622 AC132479.1-201ENST00000449160 144 ntBASIC0.18□□□□□ -2.38
CLIP1P30622 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.18□□□□□ -2.38
CLIP1P30622 RPL21P47-201ENST00000483696 477 ntBASIC0.18□□□□□ -2.38
CLIP1P30622 PDCD5P2-201ENST00000507570 312 ntBASIC0.18□□□□□ -2.38
CLIP1P30622 AC090142.3-201ENST00000519012 385 ntBASIC0.18□□□□□ -2.38
CLIP1P30622 MIR3167-201ENST00000579623 85 ntBASIC0.18□□□□□ -2.38
CLIP1P30622 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CLIP1P30622 MTND5P31-201ENST00000419366 1374 ntBASIC0.17□□□□□ -2.38
CLIP1P30622 MTND4P14-201ENST00000435799 1354 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms