Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SNRPEP7-201ENST00000438350 220 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.05□□□□□ -2.24
COL4A5P29400 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.05□□□□□ -2.24
COL4A5P29400 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.05□□□□□ -2.24
COL4A5P29400 AC005908.1-201ENST00000468701 347 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.05□□□□□ -2.24
COL4A5P29400 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.05□□□□□ -2.24
COL4A5P29400 AL132657.2-201ENST00000564417 358 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 SNRPGP17-201ENST00000603780 214 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 AC091152.3-201ENST00000604227 325 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 AC034229.4-201ENST00000607861 441 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.05□□□□□ -2.24
COL4A5P29400 TUG1_2.1-201ENST00000614234 87 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 AC109809.1-201ENST00000619665 545 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 AP003485.1-201ENST00000625093 753 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 AC091812.1-201ENST00000432235 1948 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
COL4A5P29400 SNORA16B-201ENST00000364674 135 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
COL4A5P29400 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A5P29400 RPL36AP53-201ENST00000432891 316 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 MTND6P13-201ENST00000443510 523 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A5P29400 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A5P29400 SNORD97-201ENST00000459187 142 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.04□□□□□ -2.24
COL4A5P29400 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.04□□□□□ -2.24
COL4A5P29400 RPF2P2-201ENST00000504693 896 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
COL4A5P29400 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.04□□□□□ -2.24
COL4A5P29400 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A5P29400 AP003072.2-201ENST00000527756 676 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 MTCO2P15-201ENST00000532655 656 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A5P29400 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.04□□□□□ -2.24
COL4A5P29400 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A5P29400 BNIP3P26-201ENST00000600827 554 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 AC009233.1-201ENST00000616477 371 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.04□□□□□ -2.24
COL4A5P29400 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
COL4A5P29400 snoZ40.1-201ENST00000364540 72 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 Y_RNA.471-201ENST00000384312 102 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 MIR676-201ENST00000390702 67 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 U8.14-201ENST00000390843 143 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 RNU11-3P-201ENST00000391111 133 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A5P29400 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A5P29400 AC244636.1-201ENST00000421152 228 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 ISCA1P1-201ENST00000426679 387 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 BRK1P2-201ENST00000442875 223 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 MTCO2P25-201ENST00000447065 681 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 AC006512.1-201ENST00000468816 291 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 AC104563.1-201ENST00000476147 376 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.04□□□□□ -2.24
COL4A5P29400 AC093012.1-202ENST00000549403 582 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 MIR4713-201ENST00000582691 75 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.04□□□□□ -2.24
COL4A5P29400 AC243960.4-201ENST00000600532 288 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 AL355598.1-201ENST00000604169 202 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.04□□□□□ -2.24
COL4A5P29400 AL109620.1-201ENST00000618738 1197 ntBASIC1.04□□□□□ -2.24
COL4A5P29400 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COL4A5P29400 Y_RNA.234-201ENST00000364409 97 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 RNU6-17P-201ENST00000384245 107 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 RNU6-18P-201ENST00000384527 107 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.03□□□□□ -2.24
COL4A5P29400 USP9YP33-201ENST00000412220 421 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 MTCO2P1-201ENST00000424648 477 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 USP9YP35-201ENST00000435696 412 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 AL096829.2-201ENST00000446582 742 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 AC245102.2-201ENST00000448956 180 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.03□□□□□ -2.24
COL4A5P29400 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
COL4A5P29400 AC018437.1-201ENST00000492214 406 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.03□□□□□ -2.24
COL4A5P29400 AC104072.1-201ENST00000568817 668 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 AP002802.2-201ENST00000605877 235 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 AL021368.1-201ENST00000607490 540 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 U1.36-201ENST00000620684 176 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 AC068880.4-201ENST00000623082 495 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 AC007490.1-201ENST00000624321 703 ntBASIC1.03□□□□□ -2.24
COL4A5P29400 Y_RNA.311-201ENST00000365068 96 ntBASIC1.02□□□□□ -2.25
COL4A5P29400 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
COL4A5P29400 MIR29C-201ENST00000385231 88 ntBASIC1.02□□□□□ -2.25
COL4A5P29400 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A5P29400 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A5P29400 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.02□□□□□ -2.25
COL4A5P29400 AC092648.1-201ENST00000425870 423 ntBASIC1.02□□□□□ -2.25
COL4A5P29400 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A5P29400 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A5P29400 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.02□□□□□ -2.25
COL4A5P29400 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.02□□□□□ -2.25
COL4A5P29400 SMURF2P1-201ENST00000514992 481 ntBASIC1.02□□□□□ -2.25
COL4A5P29400 SNORA44.1-201ENST00000517031 108 ntBASIC1.02□□□□□ -2.25
COL4A5P29400 RNU6-1028P-201ENST00000517164 93 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms