Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL441985.1-201ENST00000457727 251 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 RNU7-169P-201ENST00000459456 61 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 RPS29P27-201ENST00000463711 170 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.5□□□□□ -1.69
ERCC3P19447 AC017037.1-201ENST00000508460 471 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 RN7SKP272-201ENST00000516988 232 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 AC009812.2-201ENST00000517657 457 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.5□□□□□ -1.69
ERCC3P19447 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.5□□□□□ -1.69
ERCC3P19447 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.5□□□□□ -1.69
ERCC3P19447 VN1R107P-201ENST00000601784 209 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 AC012314.7-201ENST00000619693 93 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 AC119674.1-207ENST00000641355 633 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 AC233263.6-201ENST00000631132 1963 ntBASIC4.5□□□□□ -1.69
ERCC3P19447 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.5□□□□□ -1.69
ERCC3P19447 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
ERCC3P19447 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
ERCC3P19447 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ERCC3P19447 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ERCC3P19447 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.49□□□□□ -1.69
ERCC3P19447 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.49□□□□□ -1.69
ERCC3P19447 Y_RNA.496-201ENST00000384444 101 ntBASIC4.49□□□□□ -1.69
ERCC3P19447 MIR147B-201ENST00000390185 80 ntBASIC4.49□□□□□ -1.69
ERCC3P19447 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ERCC3P19447 Y_RNA.605-201ENST00000410577 105 ntBASIC4.49□□□□□ -1.69
ERCC3P19447 AP000275.1-201ENST00000411943 390 ntBASIC4.49□□□□□ -1.69
ERCC3P19447 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.49□□□□□ -1.69
ERCC3P19447 PTGES3P4-201ENST00000426243 356 ntBASIC4.49□□□□□ -1.69
ERCC3P19447 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.49□□□□□ -1.69
ERCC3P19447 RPL30P12-201ENST00000474666 353 ntBASIC4.49□□□□□ -1.69
ERCC3P19447 SNORA31.21-201ENST00000517180 77 ntBASIC4.49□□□□□ -1.69
ERCC3P19447 HSBP1P1-201ENST00000555205 166 ntBASIC4.49□□□□□ -1.69
ERCC3P19447 SUB1P3-201ENST00000564581 315 ntBASIC4.49□□□□□ -1.69
ERCC3P19447 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.49□□□□□ -1.69
ERCC3P19447 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.49□□□□□ -1.69
ERCC3P19447 AL355877.2-201ENST00000603670 358 ntBASIC4.49□□□□□ -1.69
ERCC3P19447 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.49□□□□□ -1.69
ERCC3P19447 AC019176.2-201ENST00000611579 315 ntBASIC4.49□□□□□ -1.69
ERCC3P19447 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.49□□□□□ -1.69
ERCC3P19447 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ERCC3P19447 SNORD50.1-201ENST00000362987 71 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 AC117470.1-201ENST00000381974 330 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 MIR767-201ENST00000390228 109 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 MRPL42P3-201ENST00000401492 326 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 AC007098.1-201ENST00000420122 367 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 AL591419.1-201ENST00000427423 339 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 AC096644.2-201ENST00000429278 159 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 RPL21P11-201ENST00000461458 483 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.48□□□□□ -1.69
ERCC3P19447 AC007375.1-201ENST00000554513 578 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.48□□□□□ -1.69
ERCC3P19447 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.48□□□□□ -1.69
ERCC3P19447 AC004584.2-201ENST00000570407 410 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 AC116312.1-201ENST00000606841 314 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 AC009318.2-201ENST00000610917 651 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 AC084757.4-201ENST00000616350 526 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 U7.8-201ENST00000619968 63 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 AC091925.1-201ENST00000623204 462 ntBASIC4.48□□□□□ -1.69
ERCC3P19447 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.48□□□□□ -1.69
ERCC3P19447 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.48□□□□□ -1.69
ERCC3P19447 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
ERCC3P19447 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
ERCC3P19447 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ERCC3P19447 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ERCC3P19447 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ERCC3P19447 AC233981.2-201ENST00000611524 1614 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 RBBP8P1-201ENST00000449447 1844 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.47□□□□□ -1.69
ERCC3P19447 Y_RNA.39-201ENST00000362620 98 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 SNORA63C-201ENST00000364578 129 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 RNU6-1032P-201ENST00000384100 107 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 RNU6-738P-201ENST00000384531 106 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 Y_RNA.577-201ENST00000384794 101 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 MIR625-201ENST00000385047 85 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 RNU1-101P-201ENST00000391171 127 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 AC113618.1-201ENST00000416747 285 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 AC138623.1-201ENST00000418060 216 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 AC245291.1-201ENST00000419501 328 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.47□□□□□ -1.69
ERCC3P19447 MTCYBP10-201ENST00000424905 650 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 AL133162.1-201ENST00000463228 453 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 RN7SL271P-201ENST00000487601 295 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 AC021146.2-201ENST00000504736 556 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 DNAJC8P1-201ENST00000554535 372 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 AL161756.2-201ENST00000604597 246 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 AL773545.4-201ENST00000637262 310 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 AL513478.4-201ENST00000641636 310 ntBASIC4.47□□□□□ -1.69
ERCC3P19447 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ERCC3P19447 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ERCC3P19447 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
ERCC3P19447 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ERCC3P19447 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.46□□□□□ -1.7
ERCC3P19447 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ERCC3P19447 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ERCC3P19447 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 Y_RNA.80-201ENST00000362996 102 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 RNY3P11-201ENST00000364153 102 ntBASIC4.46□□□□□ -1.7
ERCC3P19447 RNU6-968P-201ENST00000384076 107 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms