Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 SNORD14B-201ENST00000364533 90 ntBASIC3.4□□□□□ -1.87
RHOP08100 RNU6-384P-201ENST00000364900 104 ntBASIC3.4□□□□□ -1.87
RHOP08100 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RHOP08100 AL592148.1-201ENST00000413568 445 ntBASIC3.4□□□□□ -1.87
RHOP08100 MCFD2P1-201ENST00000417812 300 ntBASIC3.4□□□□□ -1.87
RHOP08100 AL353705.1-201ENST00000433468 480 ntBASIC3.4□□□□□ -1.87
RHOP08100 SETP5-201ENST00000437270 562 ntBASIC3.4□□□□□ -1.87
RHOP08100 Z82210.1-201ENST00000440037 231 ntBASIC3.4□□□□□ -1.87
RHOP08100 DAP3P1-201ENST00000441522 278 ntBASIC3.4□□□□□ -1.87
RHOP08100 PTP4A1P4-201ENST00000512479 322 ntBASIC3.4□□□□□ -1.87
RHOP08100 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.4□□□□□ -1.87
RHOP08100 RNU6-307P-201ENST00000516743 106 ntBASIC3.4□□□□□ -1.87
RHOP08100 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.4□□□□□ -1.87
RHOP08100 AC104576.1-201ENST00000524225 88 ntBASIC3.4□□□□□ -1.87
RHOP08100 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RHOP08100 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RHOP08100 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.4□□□□□ -1.87
RHOP08100 AP000787.2-201ENST00000604432 568 ntBASIC3.4□□□□□ -1.87
RHOP08100 AC008121.3-201ENST00000618726 433 ntBASIC3.4□□□□□ -1.87
RHOP08100 MIR6852-201ENST00000621699 66 ntBASIC3.4□□□□□ -1.87
RHOP08100 AC091925.1-201ENST00000623204 462 ntBASIC3.4□□□□□ -1.87
RHOP08100 AC018692.3-201ENST00000623929 123 ntBASIC3.4□□□□□ -1.87
RHOP08100 AC092608.2-201ENST00000624427 218 ntBASIC3.4□□□□□ -1.87
RHOP08100 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.4□□□□□ -1.87
RHOP08100 AL365361.1-201ENST00000566942 3481 ntBASIC3.4□□□□□ -1.87
RHOP08100 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RHOP08100 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RHOP08100 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
RHOP08100 AL049641.1-201ENST00000441055 1948 ntBASIC3.39□□□□□ -1.87
RHOP08100 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RHOP08100 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RHOP08100 RNU6-596P-201ENST00000365395 98 ntBASIC3.39□□□□□ -1.87
RHOP08100 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RHOP08100 RNU6-1032P-201ENST00000384100 107 ntBASIC3.39□□□□□ -1.87
RHOP08100 Y_RNA.473-201ENST00000384333 102 ntBASIC3.39□□□□□ -1.87
RHOP08100 MIR517A-201ENST00000385001 87 ntBASIC3.39□□□□□ -1.87
RHOP08100 SNORD73A-201ENST00000386062 65 ntBASIC3.39□□□□□ -1.87
RHOP08100 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RHOP08100 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.39□□□□□ -1.87
RHOP08100 AL096701.2-201ENST00000416920 238 ntBASIC3.39□□□□□ -1.87
RHOP08100 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.39□□□□□ -1.87
RHOP08100 AC007919.1-201ENST00000429380 217 ntBASIC3.39□□□□□ -1.87
RHOP08100 AL133396.1-201ENST00000432048 687 ntBASIC3.39□□□□□ -1.87
RHOP08100 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.39□□□□□ -1.87
RHOP08100 MTND3P2-201ENST00000438452 342 ntBASIC3.39□□□□□ -1.87
RHOP08100 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.39□□□□□ -1.87
RHOP08100 AC009237.8-201ENST00000445492 379 ntBASIC3.39□□□□□ -1.87
RHOP08100 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.39□□□□□ -1.87
RHOP08100 AL136097.1-201ENST00000456945 913 ntBASIC3.39□□□□□ -1.87
RHOP08100 KC877373.1-201ENST00000479066 408 ntBASIC3.39□□□□□ -1.87
RHOP08100 RNU6-470P-201ENST00000515954 104 ntBASIC3.39□□□□□ -1.87
RHOP08100 AC107934.2-201ENST00000518653 310 ntBASIC3.39□□□□□ -1.87
RHOP08100 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.39□□□□□ -1.87
RHOP08100 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.39□□□□□ -1.87
RHOP08100 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.39□□□□□ -1.87
RHOP08100 AC005899.2-201ENST00000584353 90 ntBASIC3.39□□□□□ -1.87
RHOP08100 AC008737.2-201ENST00000599446 118 ntBASIC3.39□□□□□ -1.87
RHOP08100 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.39□□□□□ -1.87
RHOP08100 AC123912.5-201ENST00000605470 343 ntBASIC3.39□□□□□ -1.87
RHOP08100 AL591516.1-201ENST00000611326 274 ntBASIC3.39□□□□□ -1.87
RHOP08100 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.39□□□□□ -1.87
RHOP08100 AC083806.3-201ENST00000614016 455 ntBASIC3.39□□□□□ -1.87
RHOP08100 AL110115.1-201ENST00000614396 364 ntBASIC3.39□□□□□ -1.87
RHOP08100 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.39□□□□□ -1.87
RHOP08100 AC017071.1-201ENST00000564407 2204 ntBASIC3.39□□□□□ -1.87
RHOP08100 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.39□□□□□ -1.87
RHOP08100 RNU6-490P-201ENST00000362985 107 ntBASIC3.38□□□□□ -1.87
RHOP08100 RNU1-140P-201ENST00000365040 165 ntBASIC3.38□□□□□ -1.87
RHOP08100 RNU6-842P-201ENST00000384269 107 ntBASIC3.38□□□□□ -1.87
RHOP08100 SNORA41-201ENST00000384675 132 ntBASIC3.38□□□□□ -1.87
RHOP08100 SNORA40C-201ENST00000391285 128 ntBASIC3.38□□□□□ -1.87
RHOP08100 AL445529.1-201ENST00000398713 389 ntBASIC3.38□□□□□ -1.87
RHOP08100 AL591034.1-201ENST00000407447 340 ntBASIC3.38□□□□□ -1.87
RHOP08100 AL030996.1-201ENST00000411430 235 ntBASIC3.38□□□□□ -1.87
RHOP08100 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.38□□□□□ -1.87
RHOP08100 AL158071.1-201ENST00000430315 461 ntBASIC3.38□□□□□ -1.87
RHOP08100 AL627311.1-201ENST00000431514 115 ntBASIC3.38□□□□□ -1.87
RHOP08100 PIGFP3-201ENST00000441918 722 ntBASIC3.38□□□□□ -1.87
RHOP08100 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.38□□□□□ -1.87
RHOP08100 MTND5P22-201ENST00000458380 195 ntBASIC3.38□□□□□ -1.87
RHOP08100 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.38□□□□□ -1.87
RHOP08100 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.38□□□□□ -1.87
RHOP08100 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.38□□□□□ -1.87
RHOP08100 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RHOP08100 AC022080.3-201ENST00000544433 482 ntBASIC3.38□□□□□ -1.87
RHOP08100 MIR2682-201ENST00000580305 110 ntBASIC3.38□□□□□ -1.87
RHOP08100 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.38□□□□□ -1.87
RHOP08100 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.38□□□□□ -1.87
RHOP08100 uc_338.1-201ENST00000612113 180 ntBASIC3.38□□□□□ -1.87
RHOP08100 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.38□□□□□ -1.87
RHOP08100 Z69720.2-201ENST00000624755 279 ntBASIC3.38□□□□□ -1.87
RHOP08100 U6.98-201ENST00000637157 84 ntBASIC3.38□□□□□ -1.87
RHOP08100 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.38□□□□□ -1.87
RHOP08100 AL136164.4-201ENST00000625013 2135 ntBASIC3.38□□□□□ -1.87
RHOP08100 AL021368.2-201ENST00000606125 5352 ntBASIC3.38□□□□□ -1.87
RHOP08100 AC118273.1-201ENST00000525324 3006 ntBASIC3.38□□□□□ -1.87
RHOP08100 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RHOP08100 Y_RNA.151-201ENST00000363566 112 ntBASIC3.37□□□□□ -1.87
RHOP08100 Y_RNA.158-201ENST00000363651 101 ntBASIC3.37□□□□□ -1.87
RHOP08100 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms