Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC093852.1-201ENST00000503587 266 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AC098862.1-201ENST00000504991 413 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 FAM206BP-201ENST00000510179 541 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 MTND2P31-201ENST00000512602 616 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 RNA5SP216-201ENST00000516111 123 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AC009712.1-201ENST00000564938 316 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AC025678.1-201ENST00000567861 338 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 AL158211.2-201ENST00000607282 395 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 Z82243.1-201ENST00000609432 473 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 RNU6-1192P-201ENST00000612197 107 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 uc_338.15-201ENST00000615470 191 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 RNU6-489P-201ENST00000618289 107 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.18□□□□□ -2.22
HLA-DQB2P05538 ZNF680P1-201ENST00000436625 1469 ntBASIC1.18□□□□□ -2.22
HLA-DQB2P05538 RNA5SP432-201ENST00000362480 116 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 SNORA4.3-201ENST00000365564 137 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.17□□□□□ -2.22
HLA-DQB2P05538 RNU6-546P-201ENST00000383991 107 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 RNU6-413P-201ENST00000384115 107 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 RNU6-843P-201ENST00000384454 104 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 MIR30A-201ENST00000385092 71 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 RNU6-1025P-201ENST00000410629 104 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 SRIP3-201ENST00000413200 219 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DQB2P05538 TXNL1P1-201ENST00000429528 554 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 LARP1BP3-201ENST00000437229 869 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 MTCO2P20-201ENST00000437339 673 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AC007327.1-201ENST00000447461 264 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQB2P05538 RNU6-953P-201ENST00000459154 107 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AC114801.2-201ENST00000503825 781 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AC109927.2-201ENST00000506416 303 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AP004247.1-201ENST00000531556 1289 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AC022616.8-201ENST00000533569 253 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AL157871.3-201ENST00000557231 293 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AC136618.2-201ENST00000575091 400 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AP001004.1-201ENST00000582468 324 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 BNIP3P30-201ENST00000601184 574 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 BCRP9-201ENST00000605312 388 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AL355472.4-201ENST00000610233 626 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AC099842.1-201ENST00000619919 596 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AC092656.1-203ENST00000624134 423 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
HLA-DQB2P05538 HAUS6P2-201ENST00000433254 2404 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HLA-DQB2P05538 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
HLA-DQB2P05538 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
HLA-DQB2P05538 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HLA-DQB2P05538 RNU6-529P-201ENST00000363383 104 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 RNU6-487P-201ENST00000365430 104 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.16□□□□□ -2.22
HLA-DQB2P05538 SNORA75B-201ENST00000384053 137 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 RNU6-1257P-201ENST00000384625 110 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.16□□□□□ -2.22
HLA-DQB2P05538 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 MIR1305-201ENST00000408300 86 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DQB2P05538 MTCO3P5-201ENST00000433620 714 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AL606517.1-201ENST00000446914 387 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 HSPE1P24-201ENST00000450782 238 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.16□□□□□ -2.22
HLA-DQB2P05538 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AL121594.1-201ENST00000475906 575 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 RNU6-914P-201ENST00000516749 109 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 SNORA44.1-201ENST00000517031 108 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AC018630.3-201ENST00000542637 96 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 BNIP3P27-201ENST00000599991 412 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AL606834.3-201ENST00000602615 496 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 WISP1-OT1-201ENST00000602893 642 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 PRR13P7-201ENST00000605538 430 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AL050343.2-201ENST00000607338 280 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AL365204.3-201ENST00000612448 685 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DQB2P05538 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AC006386.1-201ENST00000619436 415 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AC009269.6-201ENST00000621778 588 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.16□□□□□ -2.22
HLA-DQB2P05538 MIR3529-201ENST00000637713 78 ntBASIC1.16□□□□□ -2.22
HLA-DQB2P05538 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
HLA-DQB2P05538 Y_RNA.40-201ENST00000362645 93 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 RNU6-942P-201ENST00000363002 107 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 RNU6-622P-201ENST00000384272 103 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 SNORA48.1-201ENST00000390879 135 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 BTF3L4P2-201ENST00000392798 346 ntBASIC1.15□□□□□ -2.23
HLA-DQB2P05538 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HLA-DQB2P05538 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HLA-DQB2P05538 ERHP2-201ENST00000402323 299 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms