Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 CENPCP1-201ENST00000533085 2578 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 RNU6-371P-201ENST00000364283 108 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 Y_RNA.367-201ENST00000365544 101 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 RNU5A-2P-201ENST00000384337 116 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 Y_RNA.576-201ENST00000384781 102 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 RNU2-8P-201ENST00000410727 190 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 EIF4EP4-201ENST00000424916 578 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 RPL31P35-201ENST00000431058 377 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AL445646.1-201ENST00000431784 216 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 NDUFB1P2-201ENST00000449477 176 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 SNRPGP9-201ENST00000456025 225 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AL441985.1-201ENST00000457727 251 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AC116562.3-201ENST00000506136 177 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 RNU6-685P-201ENST00000517088 95 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AC068587.5-201ENST00000528506 175 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AC136619.2-201ENST00000563361 631 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AC024614.2-201ENST00000577584 372 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 BNIP3P30-201ENST00000601184 574 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AL713866.2-201ENST00000603579 219 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AL670379.4-201ENST00000605279 254 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 NDUFA8P1-201ENST00000605525 367 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AL449363.1-201ENST00000617815 186 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AC091931.1-201ENST00000623488 728 ntBASIC1.71□□□□□ -2.14
HLA-DPB1P04440 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HLA-DPB1P04440 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HLA-DPB1P04440 RNU6-179P-201ENST00000363350 107 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 RNY1P12-201ENST00000364251 105 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 SNORD115-7-201ENST00000365306 82 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 RNU6-1032P-201ENST00000384100 107 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 RNU2-2P-201ENST00000410396 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 RNA5SP111-201ENST00000411386 101 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 MTND3P17-201ENST00000416968 344 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DPB1P04440 PGBD4P6-201ENST00000421501 610 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AC008267.5-201ENST00000424928 265 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AL031667.1-201ENST00000440222 725 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DPB1P04440 RPL38P4-201ENST00000502376 214 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DPB1P04440 Y_RNA.687-201ENST00000516558 91 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 RNU7-193P-201ENST00000516723 65 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DPB1P04440 OR5AQ1P-201ENST00000527596 927 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AC087883.1-201ENST00000551882 391 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DPB1P04440 CLIC4P2-201ENST00000601934 717 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AC012493.3-201ENST00000604494 112 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AC093788.1-201ENST00000609356 927 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 U2.15-201ENST00000611544 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 U2.16-201ENST00000613119 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 U2.12-201ENST00000613778 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 U2.20-201ENST00000613956 192 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 U2.9-201ENST00000615427 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 U2.11-201ENST00000616345 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 U2.2-201ENST00000616535 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AC108479.2-201ENST00000617314 601 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 U2.3-201ENST00000617785 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 U2.19-201ENST00000618602 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 RNU2-1-201ENST00000618664 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 U2.6-201ENST00000619225 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 U2.5-201ENST00000619465 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 U2.10-201ENST00000620268 191 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AC012640.5-201ENST00000623897 319 ntBASIC1.7□□□□□ -2.14
HLA-DPB1P04440 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DPB1P04440 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.7□□□□□ -2.14
HLA-DPB1P04440 AP000568.1-201ENST00000282964 442 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
HLA-DPB1P04440 AL591034.2-201ENST00000402839 359 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 RNU6-248P-201ENST00000410720 107 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 AL030996.1-201ENST00000411430 235 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 RPL21P90-201ENST00000415692 466 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 EIF1AXP1-201ENST00000419267 435 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 MTCO3P5-201ENST00000433620 714 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DPB1P04440 MTND2P4-201ENST00000445034 1004 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DPB1P04440 AL033528.1-201ENST00000453780 140 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DPB1P04440 SNRPFP4-201ENST00000456366 242 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DPB1P04440 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DPB1P04440 MTAPP1-201ENST00000489154 819 ntBASIC1.69□□□□□ -2.14
HLA-DPB1P04440 RNU1-41P-201ENST00000516161 162 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms