Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RNU6-622P-201ENST00000384272 103 ntBASIC2.09□□□□□ -2.07
MBD3O95983 Y_RNA.500-201ENST00000384466 111 ntBASIC2.09□□□□□ -2.07
MBD3O95983 RNU1-57P-201ENST00000384491 166 ntBASIC2.09□□□□□ -2.07
MBD3O95983 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
MBD3O95983 CISD1P1-201ENST00000393907 327 ntBASIC2.09□□□□□ -2.07
MBD3O95983 RNA5SP390-201ENST00000410191 113 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.09□□□□□ -2.07
MBD3O95983 CYCSP46-201ENST00000423569 204 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.09□□□□□ -2.07
MBD3O95983 AC009961.2-201ENST00000435771 251 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AC073614.1-201ENST00000438690 650 ntBASIC2.09□□□□□ -2.07
MBD3O95983 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.09□□□□□ -2.07
MBD3O95983 AC009238.1-201ENST00000442165 424 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AC009237.6-201ENST00000446969 424 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AL133217.1-201ENST00000450980 425 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AL033528.1-201ENST00000453780 140 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.09□□□□□ -2.07
MBD3O95983 SNORA59A-201ENST00000459326 152 ntBASIC2.09□□□□□ -2.07
MBD3O95983 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
MBD3O95983 MTCYBP35-201ENST00000503630 1137 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AC116562.3-201ENST00000506136 177 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AC010486.1-201ENST00000511793 424 ntBASIC2.09□□□□□ -2.07
MBD3O95983 RNA5SP137-201ENST00000516833 135 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AC090572.1-201ENST00000519251 160 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.09□□□□□ -2.07
MBD3O95983 AC068587.5-201ENST00000528506 175 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AC087883.1-201ENST00000551882 391 ntBASIC2.09□□□□□ -2.07
MBD3O95983 MIR5692A1-201ENST00000580523 69 ntBASIC2.09□□□□□ -2.07
MBD3O95983 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.09□□□□□ -2.07
MBD3O95983 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
MBD3O95983 FARSBP1-201ENST00000435808 1778 ntBASIC2.08□□□□□ -2.08
MBD3O95983 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.08□□□□□ -2.08
MBD3O95983 RBBP8P1-201ENST00000449447 1844 ntBASIC2.08□□□□□ -2.08
MBD3O95983 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MBD3O95983 OR4G2P-201ENST00000328113 903 ntBASIC2.08□□□□□ -2.08
MBD3O95983 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MBD3O95983 SNORD3E-201ENST00000362899 217 ntBASIC2.08□□□□□ -2.08
MBD3O95983 RNU6-179P-201ENST00000363350 107 ntBASIC2.08□□□□□ -2.08
MBD3O95983 MIR578-201ENST00000384828 96 ntBASIC2.08□□□□□ -2.08
MBD3O95983 MIR10A-201ENST00000385043 110 ntBASIC2.08□□□□□ -2.08
MBD3O95983 AL049545.1-201ENST00000401856 572 ntBASIC2.08□□□□□ -2.08
MBD3O95983 RAP1BP3-201ENST00000407180 549 ntBASIC2.08□□□□□ -2.08
MBD3O95983 RN7SKP32-201ENST00000410167 303 ntBASIC2.08□□□□□ -2.08
MBD3O95983 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.08□□□□□ -2.08
MBD3O95983 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.08□□□□□ -2.08
MBD3O95983 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.08□□□□□ -2.08
MBD3O95983 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.08□□□□□ -2.08
MBD3O95983 AC104850.1-201ENST00000435940 476 ntBASIC2.08□□□□□ -2.08
MBD3O95983 GPM6BP3-201ENST00000442797 145 ntBASIC2.08□□□□□ -2.08
MBD3O95983 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.08□□□□□ -2.08
MBD3O95983 AC079781.2-201ENST00000446424 169 ntBASIC2.08□□□□□ -2.08
MBD3O95983 CKS1BP2-201ENST00000497342 240 ntBASIC2.08□□□□□ -2.08
MBD3O95983 AC107393.1-201ENST00000512403 346 ntBASIC2.08□□□□□ -2.08
MBD3O95983 AC119751.5-201ENST00000514077 770 ntBASIC2.08□□□□□ -2.08
MBD3O95983 SCARNA24.1-201ENST00000516465 137 ntBASIC2.08□□□□□ -2.08
MBD3O95983 RNU2-44P-201ENST00000516795 194 ntBASIC2.08□□□□□ -2.08
MBD3O95983 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.08□□□□□ -2.08
MBD3O95983 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.08□□□□□ -2.08
MBD3O95983 MIR3915-201ENST00000578518 97 ntBASIC2.08□□□□□ -2.08
MBD3O95983 MIR3162-201ENST00000581818 82 ntBASIC2.08□□□□□ -2.08
MBD3O95983 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.08□□□□□ -2.08
MBD3O95983 AL133173.2-201ENST00000614270 90 ntBASIC2.08□□□□□ -2.08
MBD3O95983 AP001506.1-201ENST00000615444 211 ntBASIC2.08□□□□□ -2.08
MBD3O95983 RMST_4.1-201ENST00000616886 107 ntBASIC2.08□□□□□ -2.08
MBD3O95983 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.08□□□□□ -2.08
MBD3O95983 AC019226.2-201ENST00000625973 424 ntBASIC2.08□□□□□ -2.08
MBD3O95983 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.08□□□□□ -2.08
MBD3O95983 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.08□□□□□ -2.08
MBD3O95983 AL136360.1-201ENST00000503377 1900 ntBASIC2.08□□□□□ -2.08
MBD3O95983 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MBD3O95983 RNU6-858P-201ENST00000362436 107 ntBASIC2.07□□□□□ -2.08
MBD3O95983 RNU4-21P-201ENST00000362802 126 ntBASIC2.07□□□□□ -2.08
MBD3O95983 RNU6-384P-201ENST00000364900 104 ntBASIC2.07□□□□□ -2.08
MBD3O95983 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
MBD3O95983 AL133475.1-201ENST00000404414 305 ntBASIC2.07□□□□□ -2.08
MBD3O95983 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
MBD3O95983 EEF1A1P40-201ENST00000412883 573 ntBASIC2.07□□□□□ -2.08
MBD3O95983 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.07□□□□□ -2.08
MBD3O95983 MTATP6P16-201ENST00000434543 526 ntBASIC2.07□□□□□ -2.08
MBD3O95983 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.07□□□□□ -2.08
MBD3O95983 AL360271.2-201ENST00000447710 161 ntBASIC2.07□□□□□ -2.08
MBD3O95983 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
MBD3O95983 AC012308.1-201ENST00000451232 178 ntBASIC2.07□□□□□ -2.08
MBD3O95983 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.07□□□□□ -2.08
MBD3O95983 RNA5SP269-201ENST00000459032 137 ntBASIC2.07□□□□□ -2.08
MBD3O95983 SNORD42A-201ENST00000459584 64 ntBASIC2.07□□□□□ -2.08
MBD3O95983 RPL21P99-201ENST00000480369 423 ntBASIC2.07□□□□□ -2.08
MBD3O95983 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.07□□□□□ -2.08
MBD3O95983 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.07□□□□□ -2.08
MBD3O95983 RNU6-759P-201ENST00000516740 103 ntBASIC2.07□□□□□ -2.08
MBD3O95983 SNORA31.25-201ENST00000517242 134 ntBASIC2.07□□□□□ -2.08
MBD3O95983 RANP3-201ENST00000530970 276 ntBASIC2.07□□□□□ -2.08
MBD3O95983 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.07□□□□□ -2.08
MBD3O95983 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.07□□□□□ -2.08
MBD3O95983 AC025678.1-201ENST00000567861 338 ntBASIC2.07□□□□□ -2.08
MBD3O95983 AC007229.1-201ENST00000590455 412 ntBASIC2.07□□□□□ -2.08
MBD3O95983 AC078899.2-201ENST00000595282 212 ntBASIC2.07□□□□□ -2.08
MBD3O95983 BNIP3P30-201ENST00000601184 574 ntBASIC2.07□□□□□ -2.08
MBD3O95983 AC073410.2-201ENST00000603240 332 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms