Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SNORD115-48-201ENST00000364764 76 ntBASIC0.35□□□□□ -2.35
SIX6O95475 RNU6-482P-201ENST00000391068 107 ntBASIC0.35□□□□□ -2.35
SIX6O95475 RNU6-796P-201ENST00000391086 107 ntBASIC0.35□□□□□ -2.35
SIX6O95475 AL031577.2-201ENST00000404133 280 ntBASIC0.35□□□□□ -2.35
SIX6O95475 AC114482.1-201ENST00000418010 247 ntBASIC0.35□□□□□ -2.35
SIX6O95475 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.35□□□□□ -2.35
SIX6O95475 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.35□□□□□ -2.35
SIX6O95475 AC010099.3-201ENST00000423896 409 ntBASIC0.35□□□□□ -2.35
SIX6O95475 C8orf59P1-201ENST00000429930 303 ntBASIC0.35□□□□□ -2.35
SIX6O95475 TPTE2P1-204ENST00000435256 593 ntBASIC0.35□□□□□ -2.35
SIX6O95475 TRBVA-201ENST00000498804 316 ntBASIC0.35□□□□□ -2.35
SIX6O95475 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.35□□□□□ -2.35
SIX6O95475 RNU6-991P-201ENST00000516168 107 ntBASIC0.35□□□□□ -2.35
SIX6O95475 RNA5SP503-201ENST00000517047 117 ntBASIC0.35□□□□□ -2.35
SIX6O95475 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.35□□□□□ -2.35
SIX6O95475 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.35□□□□□ -2.35
SIX6O95475 AC133485.1-201ENST00000567176 124 ntBASIC0.35□□□□□ -2.35
SIX6O95475 AC138907.6-201ENST00000568401 126 ntBASIC0.35□□□□□ -2.35
SIX6O95475 AC133794.1-201ENST00000602731 914 ntBASIC0.35□□□□□ -2.35
SIX6O95475 AC009229.3-201ENST00000608056 282 ntBASIC0.35□□□□□ -2.35
SIX6O95475 AC018926.1-201ENST00000616335 435 ntBASIC0.35□□□□□ -2.35
SIX6O95475 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.35□□□□□ -2.35
SIX6O95475 AC022513.1-201ENST00000624512 117 ntBASIC0.35□□□□□ -2.35
SIX6O95475 MIR6767-201ENST00000637302 66 ntBASIC0.35□□□□□ -2.35
SIX6O95475 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SIX6O95475 RNU6-28P-201ENST00000362378 107 ntBASIC0.34□□□□□ -2.36
SIX6O95475 RNU6-492P-201ENST00000363035 104 ntBASIC0.34□□□□□ -2.36
SIX6O95475 SNORD114-24-201ENST00000365029 72 ntBASIC0.34□□□□□ -2.36
SIX6O95475 MIR548B-201ENST00000385247 97 ntBASIC0.34□□□□□ -2.36
SIX6O95475 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.34□□□□□ -2.36
SIX6O95475 RPS15AP12-201ENST00000419498 388 ntBASIC0.34□□□□□ -2.36
SIX6O95475 ISCA1P1-201ENST00000426679 387 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.34□□□□□ -2.36
SIX6O95475 GTF2IP3-201ENST00000433887 494 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.34□□□□□ -2.36
SIX6O95475 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.34□□□□□ -2.36
SIX6O95475 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.34□□□□□ -2.36
SIX6O95475 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.34□□□□□ -2.36
SIX6O95475 RPL37P6-201ENST00000460682 294 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AC090142.3-201ENST00000519012 385 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AC022861.1-201ENST00000522981 663 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AC018630.3-201ENST00000542637 96 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.34□□□□□ -2.36
SIX6O95475 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.34□□□□□ -2.36
SIX6O95475 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.34□□□□□ -2.36
SIX6O95475 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.34□□□□□ -2.36
SIX6O95475 AL353997.4-201ENST00000586196 166 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AF038458.1-201ENST00000588406 262 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AL390208.1-201ENST00000605885 644 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AL365434.2-201ENST00000607979 234 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AC093788.1-201ENST00000609356 927 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AP001033.2-201ENST00000609701 1003 ntBASIC0.34□□□□□ -2.36
SIX6O95475 TUG1_2.1-201ENST00000614234 87 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AC013470.4-201ENST00000619978 986 ntBASIC0.34□□□□□ -2.36
SIX6O95475 AC068647.2-201ENST00000637380 353 ntBASIC0.34□□□□□ -2.36
SIX6O95475 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
SIX6O95475 Y_RNA.234-201ENST00000364409 97 ntBASIC0.33□□□□□ -2.36
SIX6O95475 RNU6-17P-201ENST00000384245 107 ntBASIC0.33□□□□□ -2.36
SIX6O95475 RNU6-18P-201ENST00000384527 107 ntBASIC0.33□□□□□ -2.36
SIX6O95475 MIR605-201ENST00000385078 83 ntBASIC0.33□□□□□ -2.36
SIX6O95475 RNU6-1300P-201ENST00000391046 108 ntBASIC0.33□□□□□ -2.36
SIX6O95475 DHFRP6-201ENST00000401776 268 ntBASIC0.33□□□□□ -2.36
SIX6O95475 EBAG9P1-201ENST00000418955 543 ntBASIC0.33□□□□□ -2.36
SIX6O95475 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.33□□□□□ -2.36
SIX6O95475 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.33□□□□□ -2.36
SIX6O95475 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.33□□□□□ -2.36
SIX6O95475 TIMM9P1-201ENST00000436122 256 ntBASIC0.33□□□□□ -2.36
SIX6O95475 AC234064.1-201ENST00000436312 247 ntBASIC0.33□□□□□ -2.36
SIX6O95475 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.33□□□□□ -2.36
SIX6O95475 MTND1P18-201ENST00000448191 573 ntBASIC0.33□□□□□ -2.36
SIX6O95475 snoU13.8-201ENST00000458890 104 ntBASIC0.33□□□□□ -2.36
SIX6O95475 SNORD124-201ENST00000459577 104 ntBASIC0.33□□□□□ -2.36
SIX6O95475 TOMM22P6-201ENST00000465035 409 ntBASIC0.33□□□□□ -2.36
SIX6O95475 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.33□□□□□ -2.36
SIX6O95475 HMGN1P7-201ENST00000491722 313 ntBASIC0.33□□□□□ -2.36
SIX6O95475 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.33□□□□□ -2.36
SIX6O95475 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.33□□□□□ -2.36
SIX6O95475 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
SIX6O95475 RN7SKP256-201ENST00000517201 314 ntBASIC0.33□□□□□ -2.36
SIX6O95475 AL356057.1-201ENST00000533798 831 ntBASIC0.33□□□□□ -2.36
SIX6O95475 EIF1AXP2-201ENST00000555940 413 ntBASIC0.33□□□□□ -2.36
SIX6O95475 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.33□□□□□ -2.36
SIX6O95475 HMGB1P33-201ENST00000563485 527 ntBASIC0.33□□□□□ -2.36
SIX6O95475 VN1R82P-201ENST00000601481 356 ntBASIC0.33□□□□□ -2.36
SIX6O95475 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.33□□□□□ -2.36
SIX6O95475 snoU13.31-201ENST00000607291 104 ntBASIC0.33□□□□□ -2.36
SIX6O95475 RMST_10.1-201ENST00000616309 154 ntBASIC0.33□□□□□ -2.36
SIX6O95475 AC009032.1-201ENST00000617574 431 ntBASIC0.33□□□□□ -2.36
SIX6O95475 AC006213.5-201ENST00000619673 288 ntBASIC0.33□□□□□ -2.36
SIX6O95475 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.33□□□□□ -2.36
SIX6O95475 AC134026.1-201ENST00000623249 2239 ntBASIC0.33□□□□□ -2.36
SIX6O95475 RNU6-1010P-201ENST00000362757 107 ntBASIC0.32□□□□□ -2.36
SIX6O95475 RNU6-898P-201ENST00000365627 104 ntBASIC0.32□□□□□ -2.36
SIX6O95475 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SIX6O95475 AC114737.2-201ENST00000421583 173 ntBASIC0.32□□□□□ -2.36
SIX6O95475 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SIX6O95475 Z82205.1-201ENST00000428456 297 ntBASIC0.32□□□□□ -2.36
SIX6O95475 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.32□□□□□ -2.36
SIX6O95475 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.32□□□□□ -2.36
SIX6O95475 MTND4P6-201ENST00000438297 472 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms