Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
BEST1O76090 MIR449A-201ENST00000362113 91 ntBASIC2.7□□□□□ -1.98
BEST1O76090 RNU6-1010P-201ENST00000362757 107 ntBASIC2.7□□□□□ -1.98
BEST1O76090 RNU6-552P-201ENST00000362869 119 ntBASIC2.7□□□□□ -1.98
BEST1O76090 Y_RNA.324-201ENST00000365165 102 ntBASIC2.7□□□□□ -1.98
BEST1O76090 OR5H15-201ENST00000383696 930 ntBASIC2.7□□□□□ -1.98
BEST1O76090 SNORD116-20-201ENST00000384529 92 ntBASIC2.7□□□□□ -1.98
BEST1O76090 Y_RNA.559-201ENST00000384686 107 ntBASIC2.7□□□□□ -1.98
BEST1O76090 RNU6-1072P-201ENST00000384703 107 ntBASIC2.7□□□□□ -1.98
BEST1O76090 RNU6-443P-201ENST00000384780 107 ntBASIC2.7□□□□□ -1.98
BEST1O76090 OR9R1P-201ENST00000412200 877 ntBASIC2.7□□□□□ -1.98
BEST1O76090 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.7□□□□□ -1.98
BEST1O76090 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.7□□□□□ -1.98
BEST1O76090 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.7□□□□□ -1.98
BEST1O76090 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.7□□□□□ -1.98
BEST1O76090 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.7□□□□□ -1.98
BEST1O76090 PRPS1P1-201ENST00000445305 876 ntBASIC2.7□□□□□ -1.98
BEST1O76090 AC027673.1-201ENST00000456245 405 ntBASIC2.7□□□□□ -1.98
BEST1O76090 RNU7-26P-201ENST00000458980 63 ntBASIC2.7□□□□□ -1.98
BEST1O76090 SCARNA18-201ENST00000459004 134 ntBASIC2.7□□□□□ -1.98
BEST1O76090 RPL9P33-201ENST00000484311 566 ntBASIC2.7□□□□□ -1.98
BEST1O76090 AC090096.1-201ENST00000489168 390 ntBASIC2.7□□□□□ -1.98
BEST1O76090 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.7□□□□□ -1.98
BEST1O76090 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.7□□□□□ -1.98
BEST1O76090 RNA5SP76-201ENST00000516277 87 ntBASIC2.7□□□□□ -1.98
BEST1O76090 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.7□□□□□ -1.98
BEST1O76090 AP000889.1-201ENST00000530968 660 ntBASIC2.7□□□□□ -1.98
BEST1O76090 BNIP3P6-201ENST00000549284 499 ntBASIC2.7□□□□□ -1.98
BEST1O76090 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.7□□□□□ -1.98
BEST1O76090 MTCO3P23-201ENST00000561363 289 ntBASIC2.7□□□□□ -1.98
BEST1O76090 AC136619.2-201ENST00000563361 631 ntBASIC2.7□□□□□ -1.98
BEST1O76090 AC004223.2-201ENST00000590309 544 ntBASIC2.7□□□□□ -1.98
BEST1O76090 AL121917.1-203ENST00000605534 577 ntBASIC2.7□□□□□ -1.98
BEST1O76090 AL359198.2-201ENST00000611836 194 ntBASIC2.7□□□□□ -1.98
BEST1O76090 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
BEST1O76090 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BEST1O76090 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
BEST1O76090 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.7□□□□□ -1.98
BEST1O76090 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.7□□□□□ -1.98
BEST1O76090 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.7□□□□□ -1.98
BEST1O76090 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.69□□□□□ -1.98
BEST1O76090 Y_RNA.399-201ENST00000383955 105 ntBASIC2.69□□□□□ -1.98
BEST1O76090 Y_RNA.481-201ENST00000384373 102 ntBASIC2.69□□□□□ -1.98
BEST1O76090 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
BEST1O76090 RNU6-1158P-201ENST00000391167 107 ntBASIC2.69□□□□□ -1.98
BEST1O76090 AL591416.1-201ENST00000404015 867 ntBASIC2.69□□□□□ -1.98
BEST1O76090 RNA5SP390-201ENST00000410191 113 ntBASIC2.69□□□□□ -1.98
BEST1O76090 UBE2V1P10-201ENST00000414685 269 ntBASIC2.69□□□□□ -1.98
BEST1O76090 AC074117.2-201ENST00000417130 397 ntBASIC2.69□□□□□ -1.98
BEST1O76090 AC138623.1-201ENST00000418060 216 ntBASIC2.69□□□□□ -1.98
BEST1O76090 AL353193.1-201ENST00000421444 268 ntBASIC2.69□□□□□ -1.98
BEST1O76090 HMGB1P31-201ENST00000437242 427 ntBASIC2.69□□□□□ -1.98
BEST1O76090 AC073415.1-201ENST00000449240 153 ntBASIC2.69□□□□□ -1.98
BEST1O76090 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.69□□□□□ -1.98
BEST1O76090 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.69□□□□□ -1.98
BEST1O76090 MTCO3P9-201ENST00000506989 781 ntBASIC2.69□□□□□ -1.98
BEST1O76090 RPL23AP94-201ENST00000512518 302 ntBASIC2.69□□□□□ -1.98
BEST1O76090 SMURF2P1-201ENST00000514992 481 ntBASIC2.69□□□□□ -1.98
BEST1O76090 RNU2-69P-201ENST00000516061 100 ntBASIC2.69□□□□□ -1.98
BEST1O76090 CKS1BP7-201ENST00000522230 235 ntBASIC2.69□□□□□ -1.98
BEST1O76090 MTCYBP33-201ENST00000575007 1130 ntBASIC2.69□□□□□ -1.98
BEST1O76090 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.69□□□□□ -1.98
BEST1O76090 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.69□□□□□ -1.98
BEST1O76090 AP001330.5-201ENST00000607176 411 ntBASIC2.69□□□□□ -1.98
BEST1O76090 AL354950.2-201ENST00000617939 290 ntBASIC2.69□□□□□ -1.98
BEST1O76090 Z69720.2-201ENST00000624755 279 ntBASIC2.69□□□□□ -1.98
BEST1O76090 MIR6733-201ENST00000635723 61 ntBASIC2.69□□□□□ -1.98
BEST1O76090 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.69□□□□□ -1.98
BEST1O76090 RNU5E-7P-201ENST00000365290 117 ntBASIC2.68□□□□□ -1.98
BEST1O76090 MIR518C-201ENST00000384822 101 ntBASIC2.68□□□□□ -1.98
BEST1O76090 AC068050.1-201ENST00000394891 380 ntBASIC2.68□□□□□ -1.98
BEST1O76090 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.68□□□□□ -1.98
BEST1O76090 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.68□□□□□ -1.98
BEST1O76090 AC003685.2-201ENST00000422795 395 ntBASIC2.68□□□□□ -1.98
BEST1O76090 AC107401.1-201ENST00000503426 685 ntBASIC2.68□□□□□ -1.98
BEST1O76090 MTND2P33-201ENST00000506452 1031 ntBASIC2.68□□□□□ -1.98
BEST1O76090 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.68□□□□□ -1.98
BEST1O76090 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.68□□□□□ -1.98
BEST1O76090 SNORA31.23-201ENST00000517219 133 ntBASIC2.68□□□□□ -1.98
BEST1O76090 HIF1AP1-201ENST00000553642 175 ntBASIC2.68□□□□□ -1.98
BEST1O76090 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.68□□□□□ -1.98
BEST1O76090 AC139792.3-201ENST00000623525 224 ntBASIC2.68□□□□□ -1.98
BEST1O76090 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.68□□□□□ -1.98
BEST1O76090 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
BEST1O76090 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.68□□□□□ -1.98
BEST1O76090 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
BEST1O76090 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
BEST1O76090 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
BEST1O76090 SNORA38-201ENST00000363946 132 ntBASIC2.67□□□□□ -1.98
BEST1O76090 Y_RNA.255-201ENST00000364581 97 ntBASIC2.67□□□□□ -1.98
BEST1O76090 XGY1-201ENST00000381172 446 ntBASIC2.67□□□□□ -1.98
BEST1O76090 RNU6-622P-201ENST00000384272 103 ntBASIC2.67□□□□□ -1.98
BEST1O76090 MIR27B-201ENST00000385129 97 ntBASIC2.67□□□□□ -1.98
BEST1O76090 SNORA16.2-201ENST00000390991 127 ntBASIC2.67□□□□□ -1.98
BEST1O76090 RPS4XP7-201ENST00000406274 780 ntBASIC2.67□□□□□ -1.98
BEST1O76090 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.67□□□□□ -1.98
BEST1O76090 MTCYBP8-201ENST00000422855 651 ntBASIC2.67□□□□□ -1.98
BEST1O76090 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
BEST1O76090 DNAJC19P4-201ENST00000440115 345 ntBASIC2.67□□□□□ -1.98
BEST1O76090 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms