Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC069282.1-201ENST00000411911 526 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC-0.05□□□□□ -2.42
USH2AO75445 AL135790.2-201ENST00000437701 267 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 AC243964.1-201ENST00000441814 261 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
USH2AO75445 AC111000.5-201ENST00000506559 1178 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.05□□□□□ -2.42
USH2AO75445 MIR4431-201ENST00000579990 94 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 MTCO2P2-201ENST00000591258 225 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.05□□□□□ -2.42
USH2AO75445 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
USH2AO75445 ZNF204P-201ENST00000416749 2397 ntBASIC-0.05□□□□□ -2.42
USH2AO75445 CR848007.1-201ENST00000442354 1699 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 MIR608-201ENST00000384820 100 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC093106.2-201ENST00000428212 385 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC-0.06□□□□□ -2.42
USH2AO75445 RPL23AP33-201ENST00000442301 452 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC-0.06□□□□□ -2.42
USH2AO75445 AC023050.3-201ENST00000541142 333 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AL355877.2-201ENST00000603670 358 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AL353149.1-201ENST00000610667 244 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC-0.06□□□□□ -2.42
USH2AO75445 AP000943.4-201ENST00000622912 357 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AP002791.1-201ENST00000623291 381 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 RNU6-26P-201ENST00000383985 107 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 RNU6-110P-201ENST00000384508 104 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC092047.1-201ENST00000424997 240 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC109327.2-201ENST00000448339 378 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.06□□□□□ -2.42
USH2AO75445 AC087272.1-201ENST00000523624 533 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC-0.06□□□□□ -2.42
USH2AO75445 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.06□□□□□ -2.42
USH2AO75445 AL592221.1-201ENST00000605266 382 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.06□□□□□ -2.42
USH2AO75445 MTND5P33-201ENST00000571250 1450 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 RPL21P32-201ENST00000419877 477 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.06□□□□□ -2.42
USH2AO75445 MTND2P2-201ENST00000434633 945 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC-0.06□□□□□ -2.42
USH2AO75445 RNU6-1218P-201ENST00000458990 108 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC087588.1-201ENST00000462203 316 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 SNORA68.3-201ENST00000515906 83 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 CIR1P1-201ENST00000524055 1133 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC060771.1-201ENST00000582031 164 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.06□□□□□ -2.42
USH2AO75445 AC005261.5-201ENST00000596280 355 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 MIR6134-201ENST00000617606 109 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AL596245.1-201ENST00000618994 362 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC008443.7-201ENST00000622195 246 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 MIR506-201ENST00000384998 124 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC-0.06□□□□□ -2.42
USH2AO75445 CETN4P-201ENST00000432407 469 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 FCF1P6-201ENST00000456841 595 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC091959.1-201ENST00000495857 238 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC023050.1-201ENST00000498198 304 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC091874.1-201ENST00000511402 339 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC093677.1-201ENST00000514414 678 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
USH2AO75445 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC-0.06□□□□□ -2.42
USH2AO75445 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC-0.06□□□□□ -2.42
USH2AO75445 AL356157.2-201ENST00000605122 111 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 AL133370.2-201ENST00000619934 439 ntBASIC-0.06□□□□□ -2.42
USH2AO75445 RNA5SP128-201ENST00000365305 116 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 MIR29B2-201ENST00000385055 81 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 MIR124-2-201ENST00000385081 109 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.07□□□□□ -2.42
USH2AO75445 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC-0.07□□□□□ -2.42
USH2AO75445 ACA64.5-201ENST00000516207 127 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
USH2AO75445 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC-0.07□□□□□ -2.42
USH2AO75445 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.07□□□□□ -2.42
USH2AO75445 AC009310.1-201ENST00000414414 451 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC-0.07□□□□□ -2.42
USH2AO75445 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC-0.07□□□□□ -2.42
USH2AO75445 RPL7P30-201ENST00000420888 709 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.07□□□□□ -2.42
USH2AO75445 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.07□□□□□ -2.42
USH2AO75445 AC006026.2-201ENST00000457376 180 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 RPS29P15-201ENST00000458329 171 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AC006512.1-201ENST00000468816 291 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 RNU7-40P-201ENST00000516397 64 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AL121839.1-201ENST00000556233 1185 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AC090079.2-201ENST00000575289 768 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 MIRLET7D-201ENST00000362263 87 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 CALM2P3-201ENST00000400429 449 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 RNU6-735P-201ENST00000410612 107 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AC092809.3-201ENST00000415453 231 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 RPS26P5-201ENST00000418544 335 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 HSPE1P13-201ENST00000451143 297 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AL133373.1-201ENST00000497098 94 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 MTND2P13-201ENST00000577438 1039 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AC022960.3-201ENST00000619794 441 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 SNORA18.1-201ENST00000363418 128 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 SNORD114-9-201ENST00000364370 72 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 RPL21P66-201ENST00000426566 466 ntBASIC-0.07□□□□□ -2.42
USH2AO75445 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.07□□□□□ -2.42
USH2AO75445 KATNBL1P6-201ENST00000453433 915 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms