Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.51□□□□□ -2.17
SHOX2O60902 RNA5SP476-201ENST00000516613 103 ntBASIC1.51□□□□□ -2.17
SHOX2O60902 AC109329.1-201ENST00000518744 317 ntBASIC1.51□□□□□ -2.17
SHOX2O60902 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.51□□□□□ -2.17
SHOX2O60902 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.51□□□□□ -2.17
SHOX2O60902 IMMP1LP2-201ENST00000552954 492 ntBASIC1.51□□□□□ -2.17
SHOX2O60902 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.51□□□□□ -2.17
SHOX2O60902 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.51□□□□□ -2.17
SHOX2O60902 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.51□□□□□ -2.17
SHOX2O60902 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.51□□□□□ -2.17
SHOX2O60902 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.51□□□□□ -2.17
SHOX2O60902 MIR4255-201ENST00000579351 72 ntBASIC1.51□□□□□ -2.17
SHOX2O60902 RPL30P11-203ENST00000598995 310 ntBASIC1.51□□□□□ -2.17
SHOX2O60902 AC073410.2-201ENST00000603240 332 ntBASIC1.51□□□□□ -2.17
SHOX2O60902 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.51□□□□□ -2.17
SHOX2O60902 AC112220.3-201ENST00000605502 502 ntBASIC1.51□□□□□ -2.17
SHOX2O60902 AC072039.2-201ENST00000608883 439 ntBASIC1.51□□□□□ -2.17
SHOX2O60902 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.51□□□□□ -2.17
SHOX2O60902 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.51□□□□□ -2.17
SHOX2O60902 FRG1KP-201ENST00000623592 341 ntBASIC1.51□□□□□ -2.17
SHOX2O60902 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.51□□□□□ -2.17
SHOX2O60902 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
SHOX2O60902 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SHOX2O60902 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.5□□□□□ -2.17
SHOX2O60902 RNU1-62P-201ENST00000362599 164 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 RNU6-1010P-201ENST00000362757 107 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.5□□□□□ -2.17
SHOX2O60902 AL136310.1-201ENST00000404926 654 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.5□□□□□ -2.17
SHOX2O60902 EIF4EP2-201ENST00000422816 654 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 EEF1A1P39-201ENST00000440791 250 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 SNRPFP4-201ENST00000456366 242 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 AC104564.1-201ENST00000493028 407 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 AC010587.2-201ENST00000511727 448 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 RNU6-1315P-201ENST00000517187 99 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 AP005597.4-201ENST00000526762 229 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 MIR4713-201ENST00000582691 75 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 AP001981.2-201ENST00000603241 418 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 AC007363.1-201ENST00000604736 620 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 AC091834.1-201ENST00000614543 472 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 AC091965.5-201ENST00000624785 342 ntBASIC1.5□□□□□ -2.17
SHOX2O60902 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.5□□□□□ -2.17
SHOX2O60902 VN1R36P-201ENST00000414936 291 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 AC138623.1-201ENST00000418060 216 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.49□□□□□ -2.17
SHOX2O60902 AC005534.2-201ENST00000431047 433 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 HAR1A.1-201ENST00000459583 118 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 AC109927.2-201ENST00000506416 303 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.49□□□□□ -2.17
SHOX2O60902 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.49□□□□□ -2.17
SHOX2O60902 RNA5SP337-201ENST00000517007 109 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 RNU6-667P-201ENST00000517186 102 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
SHOX2O60902 AC091163.3-201ENST00000518269 1144 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.49□□□□□ -2.17
SHOX2O60902 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.49□□□□□ -2.17
SHOX2O60902 DUXAP5-201ENST00000529668 529 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.49□□□□□ -2.17
SHOX2O60902 AL160236.1-201ENST00000556317 195 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 7SK.7-201ENST00000603504 247 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 AC098614.4-201ENST00000607601 462 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 AL512598.1-201ENST00000610158 273 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 AC006386.1-201ENST00000619436 415 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 AC099842.1-201ENST00000619919 596 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
SHOX2O60902 MIR3529-201ENST00000637713 78 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 MTND5P42-201ENST00000637720 498 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
SHOX2O60902 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SHOX2O60902 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.49□□□□□ -2.17
SHOX2O60902 HAUS6P2-201ENST00000433254 2404 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SHOX2O60902 AL391987.6-201ENST00000305671 199 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
SHOX2O60902 RNU6-166P-201ENST00000384371 107 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 MIR150-201ENST00000385048 84 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 FTH1P15-201ENST00000406984 280 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 VPS26BP1-201ENST00000417155 755 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.48□□□□□ -2.17
SHOX2O60902 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.48□□□□□ -2.17
SHOX2O60902 TIMM9P1-201ENST00000436122 256 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 KATNBL1P3-201ENST00000443475 909 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 AC012308.1-201ENST00000451232 178 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 SSXP1-201ENST00000453640 473 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 RNU1-123P-201ENST00000458950 160 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 AC027575.1-201ENST00000481064 460 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 MTND1P3-201ENST00000484956 952 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 AC008834.1-201ENST00000511612 175 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 SNORA19.3-201ENST00000516165 130 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 Y_RNA.675-201ENST00000516389 149 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 RNU6-677P-201ENST00000516914 101 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.48□□□□□ -2.17
SHOX2O60902 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 AC022254.1-201ENST00000567857 235 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 AL365204.3-201ENST00000612448 685 ntBASIC1.48□□□□□ -2.17
SHOX2O60902 AL359314.1-201ENST00000616913 261 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms