Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU1-109P-201ENST00000383960 147 ntBASIC2.64□□□□□ -1.99
SSX4O60224 Y_RNA.573-201ENST00000384763 105 ntBASIC2.64□□□□□ -1.99
SSX4O60224 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.64□□□□□ -1.99
SSX4O60224 AL512633.1-201ENST00000399931 655 ntBASIC2.64□□□□□ -1.99
SSX4O60224 POLHP1-201ENST00000411806 470 ntBASIC2.64□□□□□ -1.99
SSX4O60224 AC004383.1-201ENST00000438135 289 ntBASIC2.64□□□□□ -1.99
SSX4O60224 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.64□□□□□ -1.99
SSX4O60224 AC107626.1-201ENST00000471084 183 ntBASIC2.64□□□□□ -1.99
SSX4O60224 RPS27AP9-201ENST00000477681 438 ntBASIC2.64□□□□□ -1.99
SSX4O60224 SEM1P1-201ENST00000506694 209 ntBASIC2.64□□□□□ -1.99
SSX4O60224 TBCAP3-201ENST00000512475 312 ntBASIC2.64□□□□□ -1.99
SSX4O60224 AP004607.1-201ENST00000524456 203 ntBASIC2.64□□□□□ -1.99
SSX4O60224 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.64□□□□□ -1.99
SSX4O60224 ELOCP31-201ENST00000540463 467 ntBASIC2.64□□□□□ -1.99
SSX4O60224 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SSX4O60224 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSX4O60224 VN1R80P-201ENST00000597126 338 ntBASIC2.64□□□□□ -1.99
SSX4O60224 AC092747.3-201ENST00000603769 301 ntBASIC2.64□□□□□ -1.99
SSX4O60224 RNU6-89P-201ENST00000606519 100 ntBASIC2.64□□□□□ -1.99
SSX4O60224 AC092807.2-201ENST00000609367 243 ntBASIC2.64□□□□□ -1.99
SSX4O60224 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SSX4O60224 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SSX4O60224 AC007014.2-201ENST00000615581 479 ntBASIC2.64□□□□□ -1.99
SSX4O60224 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.64□□□□□ -1.99
SSX4O60224 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.64□□□□□ -1.99
SSX4O60224 AC024614.3-201ENST00000637860 256 ntBASIC2.64□□□□□ -1.99
SSX4O60224 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.64□□□□□ -1.99
SSX4O60224 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SSX4O60224 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.64□□□□□ -1.99
SSX4O60224 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SSX4O60224 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SSX4O60224 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SSX4O60224 RPL9P7-201ENST00000330965 580 ntBASIC2.63□□□□□ -1.99
SSX4O60224 RNU6-858P-201ENST00000362436 107 ntBASIC2.63□□□□□ -1.99
SSX4O60224 RNU6-82P-201ENST00000363970 107 ntBASIC2.63□□□□□ -1.99
SSX4O60224 RNU6-877P-201ENST00000383868 107 ntBASIC2.63□□□□□ -1.99
SSX4O60224 MIR147B-201ENST00000390185 80 ntBASIC2.63□□□□□ -1.99
SSX4O60224 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.63□□□□□ -1.99
SSX4O60224 RPLP0P7-201ENST00000416050 667 ntBASIC2.63□□□□□ -1.99
SSX4O60224 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.63□□□□□ -1.99
SSX4O60224 SNRPEP10-201ENST00000420249 274 ntBASIC2.63□□□□□ -1.99
SSX4O60224 ERLEC1P1-201ENST00000433806 578 ntBASIC2.63□□□□□ -1.99
SSX4O60224 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.63□□□□□ -1.99
SSX4O60224 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.63□□□□□ -1.99
SSX4O60224 AC087884.1-201ENST00000469738 328 ntBASIC2.63□□□□□ -1.99
SSX4O60224 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.63□□□□□ -1.99
SSX4O60224 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.63□□□□□ -1.99
SSX4O60224 HIGD1AP13-201ENST00000509878 289 ntBASIC2.63□□□□□ -1.99
SSX4O60224 RNU5F-8P-201ENST00000515941 111 ntBASIC2.63□□□□□ -1.99
SSX4O60224 RNU6-189P-201ENST00000516120 101 ntBASIC2.63□□□□□ -1.99
SSX4O60224 SNORA31.6-201ENST00000516241 130 ntBASIC2.63□□□□□ -1.99
SSX4O60224 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.63□□□□□ -1.99
SSX4O60224 MIR3941-201ENST00000582572 103 ntBASIC2.63□□□□□ -1.99
SSX4O60224 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.63□□□□□ -1.99
SSX4O60224 AC107304.1-201ENST00000604229 296 ntBASIC2.63□□□□□ -1.99
SSX4O60224 AC019159.1-201ENST00000605094 187 ntBASIC2.63□□□□□ -1.99
SSX4O60224 RMST_3.1-201ENST00000611651 109 ntBASIC2.63□□□□□ -1.99
SSX4O60224 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SSX4O60224 U6atac.1-201ENST00000616025 117 ntBASIC2.63□□□□□ -1.99
SSX4O60224 Z69720.2-201ENST00000624755 279 ntBASIC2.63□□□□□ -1.99
SSX4O60224 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SSX4O60224 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.63□□□□□ -1.99
SSX4O60224 AC138915.1-201ENST00000565427 1685 ntBASIC2.63□□□□□ -1.99
SSX4O60224 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
SSX4O60224 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.62□□□□□ -1.99
SSX4O60224 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSX4O60224 MIR22-201ENST00000362190 85 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-37P-201ENST00000362692 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-11P-201ENST00000364234 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-25P-201ENST00000383873 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-1-201ENST00000383898 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-48P-201ENST00000384161 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-36P-201ENST00000384172 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-4P-201ENST00000384205 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-5P-201ENST00000384238 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-3P-201ENST00000384314 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-16P-201ENST00000384385 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-15P-201ENST00000384534 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-2-201ENST00000384627 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-29P-201ENST00000384637 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-748P-201ENST00000384648 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-9-201ENST00000384776 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-33P-201ENST00000384793 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SSX4O60224 SNORD67-201ENST00000390833 111 ntBASIC2.62□□□□□ -1.99
SSX4O60224 MIR1277-201ENST00000408536 78 ntBASIC2.62□□□□□ -1.99
SSX4O60224 EEF1A1P41-201ENST00000414667 207 ntBASIC2.62□□□□□ -1.99
SSX4O60224 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.62□□□□□ -1.99
SSX4O60224 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX4O60224 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX4O60224 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX4O60224 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.62□□□□□ -1.99
SSX4O60224 AC107083.1-201ENST00000439643 279 ntBASIC2.62□□□□□ -1.99
SSX4O60224 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-1208P-201ENST00000459588 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 Y_RNA.654-201ENST00000497848 106 ntBASIC2.62□□□□□ -1.99
SSX4O60224 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SSX4O60224 AC079140.5-201ENST00000507882 310 ntBASIC2.62□□□□□ -1.99
SSX4O60224 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms