Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC021269.2-201ENST00000532318 330 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
SLC28A1O00337 AC078814.3-201ENST00000553036 491 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 EIF4BP1-201ENST00000554881 351 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 MIR4703-201ENST00000577728 79 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 LRRC37A5P-203ENST00000580181 585 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.25□□□□□ -2.05
SLC28A1O00337 AC119751.7-201ENST00000600494 245 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 AL121917.1-203ENST00000605534 577 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 U4atac.1-201ENST00000618345 95 ntBASIC2.25□□□□□ -2.05
SLC28A1O00337 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SLC28A1O00337 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SLC28A1O00337 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.24□□□□□ -2.05
SLC28A1O00337 Y_RNA.553-201ENST00000384670 102 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 RPS4XP7-201ENST00000406274 780 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.24□□□□□ -2.05
SLC28A1O00337 AF274854.1-201ENST00000413236 615 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.24□□□□□ -2.05
SLC28A1O00337 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.24□□□□□ -2.05
SLC28A1O00337 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.24□□□□□ -2.05
SLC28A1O00337 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.24□□□□□ -2.05
SLC28A1O00337 AL109933.2-201ENST00000452651 260 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.24□□□□□ -2.05
SLC28A1O00337 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SLC28A1O00337 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.24□□□□□ -2.05
SLC28A1O00337 AC010424.1-201ENST00000506336 297 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.24□□□□□ -2.05
SLC28A1O00337 AC117532.1-201ENST00000514638 323 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 RNA5SP148-201ENST00000516527 94 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 IGLV3-17-201ENST00000519099 244 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.24□□□□□ -2.05
SLC28A1O00337 BNIP3P6-201ENST00000549284 499 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.24□□□□□ -2.05
SLC28A1O00337 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.24□□□□□ -2.05
SLC28A1O00337 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
SLC28A1O00337 AC073648.5-201ENST00000603502 305 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 AC006023.1-201ENST00000603944 259 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 AC103810.6-201ENST00000606708 136 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 AC091834.1-201ENST00000614543 472 ntBASIC2.24□□□□□ -2.05
SLC28A1O00337 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SLC28A1O00337 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.24□□□□□ -2.05
SLC28A1O00337 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.23□□□□□ -2.05
SLC28A1O00337 AC007336.1-201ENST00000576365 3828 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SLC28A1O00337 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SLC28A1O00337 RNU2-3P-201ENST00000410144 191 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 MTCO2P34-201ENST00000421994 607 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.23□□□□□ -2.05
SLC28A1O00337 MTCO1P19-201ENST00000443487 500 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 RPS3P1-201ENST00000456781 192 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.23□□□□□ -2.05
SLC28A1O00337 AC079382.1-201ENST00000493346 557 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 AC010493.1-201ENST00000513479 292 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 SNORA31.23-201ENST00000517219 133 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 AC109329.1-201ENST00000518744 317 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.23□□□□□ -2.05
SLC28A1O00337 AP000889.2-201ENST00000532684 490 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.23□□□□□ -2.05
SLC28A1O00337 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.23□□□□□ -2.05
SLC28A1O00337 MIR5007-201ENST00000583098 95 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 AC025449.1-201ENST00000603896 529 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 AL355297.2-201ENST00000604792 129 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 AL160281.1-201ENST00000605307 311 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 SNORD14A-201ENST00000606526 91 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 AC008536.2-201ENST00000607284 349 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.23□□□□□ -2.05
SLC28A1O00337 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.23□□□□□ -2.05
SLC28A1O00337 AC090582.1-201ENST00000636321 199 ntBASIC2.23□□□□□ -2.05
SLC28A1O00337 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SLC28A1O00337 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SLC28A1O00337 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SLC28A1O00337 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SLC28A1O00337 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SLC28A1O00337 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SLC28A1O00337 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SLC28A1O00337 RNU6-622P-201ENST00000384272 103 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 MIR186-201ENST00000384988 86 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 MIR524-201ENST00000385242 87 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 AL591416.1-201ENST00000404015 867 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 RN7SKP158-201ENST00000410453 326 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 OR9R1P-201ENST00000412200 877 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 CYCSP33-201ENST00000414485 327 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.22□□□□□ -2.05
SLC28A1O00337 MTATP6P18-201ENST00000417994 673 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.22□□□□□ -2.05
SLC28A1O00337 AL669831.1-202ENST00000428504 417 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.22□□□□□ -2.05
SLC28A1O00337 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.22□□□□□ -2.05
SLC28A1O00337 RPS15AP28-201ENST00000435088 386 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 MTCO2P16-201ENST00000436962 677 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 GTF2IP13-201ENST00000438487 386 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 AL161788.1-201ENST00000441805 169 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 AC124916.1-201ENST00000444020 547 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 AC108938.1-201ENST00000451204 136 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.22□□□□□ -2.05
SLC28A1O00337 GMFBP1-201ENST00000467831 427 ntBASIC2.22□□□□□ -2.05
SLC28A1O00337 AP001025.1-201ENST00000486139 332 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms