Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.56□□□□□ -2.16
DFFAO00273 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.56□□□□□ -2.16
DFFAO00273 AC006366.1-201ENST00000422002 759 ntBASIC1.56□□□□□ -2.16
DFFAO00273 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.56□□□□□ -2.16
DFFAO00273 MTND2P29-201ENST00000438595 412 ntBASIC1.56□□□□□ -2.16
DFFAO00273 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.56□□□□□ -2.16
DFFAO00273 AC012308.1-201ENST00000451232 178 ntBASIC1.56□□□□□ -2.16
DFFAO00273 AMD1P1-201ENST00000457220 922 ntBASIC1.56□□□□□ -2.16
DFFAO00273 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.56□□□□□ -2.16
DFFAO00273 HMGB1P30-201ENST00000492455 606 ntBASIC1.56□□□□□ -2.16
DFFAO00273 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.56□□□□□ -2.16
DFFAO00273 HSPE1P23-201ENST00000509838 286 ntBASIC1.56□□□□□ -2.16
DFFAO00273 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.56□□□□□ -2.16
DFFAO00273 Y_RNA.689-201ENST00000516589 107 ntBASIC1.56□□□□□ -2.16
DFFAO00273 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.56□□□□□ -2.16
DFFAO00273 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.56□□□□□ -2.16
DFFAO00273 AP000763.2-201ENST00000540641 163 ntBASIC1.56□□□□□ -2.16
DFFAO00273 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.56□□□□□ -2.16
DFFAO00273 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.56□□□□□ -2.16
DFFAO00273 AC015720.1-201ENST00000565251 277 ntBASIC1.56□□□□□ -2.16
DFFAO00273 MTCYBP33-201ENST00000575007 1130 ntBASIC1.56□□□□□ -2.16
DFFAO00273 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.56□□□□□ -2.16
DFFAO00273 AL139022.2-201ENST00000606934 443 ntBASIC1.56□□□□□ -2.16
DFFAO00273 uc_338.5-201ENST00000611839 155 ntBASIC1.56□□□□□ -2.16
DFFAO00273 uc_338.15-201ENST00000615470 191 ntBASIC1.56□□□□□ -2.16
DFFAO00273 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
DFFAO00273 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.56□□□□□ -2.16
DFFAO00273 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
DFFAO00273 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
DFFAO00273 ZNF29P-201ENST00000225587 168 ntBASIC1.55□□□□□ -2.16
DFFAO00273 Y_RNA.97-201ENST00000363094 102 ntBASIC1.55□□□□□ -2.16
DFFAO00273 MIR620-201ENST00000385232 95 ntBASIC1.55□□□□□ -2.16
DFFAO00273 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
DFFAO00273 MIR1283-2-201ENST00000408621 87 ntBASIC1.55□□□□□ -2.16
DFFAO00273 RNU2-48P-201ENST00000410694 191 ntBASIC1.55□□□□□ -2.16
DFFAO00273 UBE2V1P10-201ENST00000414685 269 ntBASIC1.55□□□□□ -2.16
DFFAO00273 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.55□□□□□ -2.16
DFFAO00273 AL022400.1-201ENST00000423946 935 ntBASIC1.55□□□□□ -2.16
DFFAO00273 MTND1P32-201ENST00000433043 938 ntBASIC1.55□□□□□ -2.16
DFFAO00273 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
DFFAO00273 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.55□□□□□ -2.16
DFFAO00273 AP004607.1-201ENST00000524456 203 ntBASIC1.55□□□□□ -2.16
DFFAO00273 AP003122.4-201ENST00000530980 758 ntBASIC1.55□□□□□ -2.16
DFFAO00273 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.55□□□□□ -2.16
DFFAO00273 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.55□□□□□ -2.16
DFFAO00273 AP001004.1-201ENST00000582468 324 ntBASIC1.55□□□□□ -2.16
DFFAO00273 AC121334.2-201ENST00000605387 271 ntBASIC1.55□□□□□ -2.16
DFFAO00273 AC126118.1-201ENST00000607744 628 ntBASIC1.55□□□□□ -2.16
DFFAO00273 AL359314.1-201ENST00000616913 261 ntBASIC1.55□□□□□ -2.16
DFFAO00273 AC024940.5-201ENST00000622889 474 ntBASIC1.55□□□□□ -2.16
DFFAO00273 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.55□□□□□ -2.16
DFFAO00273 AC006927.4-201ENST00000639187 543 ntBASIC1.55□□□□□ -2.16
DFFAO00273 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
DFFAO00273 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
DFFAO00273 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
DFFAO00273 MIR412-201ENST00000362142 91 ntBASIC1.54□□□□□ -2.16
DFFAO00273 SNORD3E-201ENST00000362899 217 ntBASIC1.54□□□□□ -2.16
DFFAO00273 RNA5SP99-201ENST00000364020 114 ntBASIC1.54□□□□□ -2.16
DFFAO00273 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
DFFAO00273 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
DFFAO00273 RNU6-622P-201ENST00000384272 103 ntBASIC1.54□□□□□ -2.16
DFFAO00273 RNU6-1274P-201ENST00000384557 107 ntBASIC1.54□□□□□ -2.16
DFFAO00273 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
DFFAO00273 MIR517C-201ENST00000385103 95 ntBASIC1.54□□□□□ -2.16
DFFAO00273 MIR29C-201ENST00000385231 88 ntBASIC1.54□□□□□ -2.16
DFFAO00273 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
DFFAO00273 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.54□□□□□ -2.16
DFFAO00273 OR9R1P-201ENST00000412200 877 ntBASIC1.54□□□□□ -2.16
DFFAO00273 MTND1P20-201ENST00000430341 950 ntBASIC1.54□□□□□ -2.16
DFFAO00273 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.54□□□□□ -2.16
DFFAO00273 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.54□□□□□ -2.16
DFFAO00273 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.54□□□□□ -2.16
DFFAO00273 MTND1P12-201ENST00000455231 147 ntBASIC1.54□□□□□ -2.16
DFFAO00273 UBE2V1P12-201ENST00000503954 474 ntBASIC1.54□□□□□ -2.16
DFFAO00273 AC091951.3-201ENST00000504093 246 ntBASIC1.54□□□□□ -2.16
DFFAO00273 Y_RNA.675-201ENST00000516389 149 ntBASIC1.54□□□□□ -2.16
DFFAO00273 AC022616.6-201ENST00000520479 119 ntBASIC1.54□□□□□ -2.16
DFFAO00273 AC011979.2-201ENST00000527568 352 ntBASIC1.54□□□□□ -2.16
DFFAO00273 DUXAP5-201ENST00000529668 529 ntBASIC1.54□□□□□ -2.16
DFFAO00273 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.54□□□□□ -2.16
DFFAO00273 HSBP1P1-201ENST00000555205 166 ntBASIC1.54□□□□□ -2.16
DFFAO00273 CLIC4P2-201ENST00000601934 717 ntBASIC1.54□□□□□ -2.16
DFFAO00273 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
DFFAO00273 AL353997.5-201ENST00000618886 171 ntBASIC1.54□□□□□ -2.16
DFFAO00273 AL607023.1-201ENST00000620045 248 ntBASIC1.54□□□□□ -2.16
DFFAO00273 AL445523.1-201ENST00000451184 1362 ntBASIC1.54□□□□□ -2.16
DFFAO00273 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
DFFAO00273 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
DFFAO00273 SNORD115-3-201ENST00000363100 82 ntBASIC1.53□□□□□ -2.16
DFFAO00273 RNU6-60P-201ENST00000364792 103 ntBASIC1.53□□□□□ -2.16
DFFAO00273 RNU6-72P-201ENST00000384285 79 ntBASIC1.53□□□□□ -2.16
DFFAO00273 RNA5SP465-201ENST00000391195 109 ntBASIC1.53□□□□□ -2.16
DFFAO00273 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
DFFAO00273 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.53□□□□□ -2.16
DFFAO00273 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.53□□□□□ -2.16
DFFAO00273 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
DFFAO00273 AL627311.1-201ENST00000431514 115 ntBASIC1.53□□□□□ -2.16
DFFAO00273 RPL23AP30-201ENST00000432419 501 ntBASIC1.53□□□□□ -2.16
DFFAO00273 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.53□□□□□ -2.16
DFFAO00273 MTCO3P5-201ENST00000433620 714 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms