Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 HIGD1AP11-201ENST00000438361 280 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 Z98949.2-201ENST00000440996 144 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 NDUFB1P2-201ENST00000449477 176 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AC107399.1-201ENST00000451226 265 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AL583843.1-201ENST00000456070 346 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AC087884.1-201ENST00000469738 328 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 RN7SL594P-201ENST00000470590 287 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AC117503.1-201ENST00000472241 394 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 RPL7P43-201ENST00000478876 753 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 MIR892C-201ENST00000516410 77 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 RNU6-256P-201ENST00000516747 97 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 RNU6-566P-201ENST00000516790 107 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AC011602.1-201ENST00000546484 331 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AMZ2P1-203ENST00000565833 850 ntBASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC187A0A096LP49 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 Y_RNA.47-201ENST00000362697 108 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 RNU6-1222P-201ENST00000384615 107 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 SNORA40C-201ENST00000391285 128 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 UBA52P6-201ENST00000399822 382 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 RPL37P10-201ENST00000412884 288 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 AC074085.1-201ENST00000413598 418 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 AL035666.1-201ENST00000446195 348 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 RPL12P25-201ENST00000455592 494 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 AP001486.1-201ENST00000463339 476 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 AC011005.2-201ENST00000487324 359 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 RN7SL504P-201ENST00000494496 287 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 RNU1-86P-201ENST00000516108 154 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 RNU1-107P-201ENST00000516617 154 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 SNORD59.2-201ENST00000516873 68 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 SNORA31.19-201ENST00000517079 126 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 AC087854.1-201ENST00000519706 414 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 HIGD1AP1-201ENST00000550979 275 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 MIR5004-201ENST00000579078 107 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 FAM157A-202ENST00000615155 405 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 Z69720.2-201ENST00000624755 279 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 AC005183.1-201ENST00000603687 1979 ntBASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC187A0A096LP49 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.28□□□□□ -1.89
CCDC187A0A096LP49 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 SNORD3E-201ENST00000362899 217 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 RNA5SP374-201ENST00000362939 125 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 RNU6-702P-201ENST00000364982 107 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.557-201ENST00000384680 107 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 MRPL42P3-201ENST00000401492 326 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.623-201ENST00000411128 95 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 AC098614.2-201ENST00000426040 255 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 AL627311.1-201ENST00000431514 115 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 AL160004.2-201ENST00000432935 350 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 RPS29P31-201ENST00000446147 164 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 MTND1P17-201ENST00000448961 204 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 BTF3P15-201ENST00000455606 336 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 RNU6-976P-201ENST00000516086 111 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 RNU6-764P-201ENST00000516396 105 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 RNA5SP454-201ENST00000517231 127 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 RNU6-323P-201ENST00000521915 107 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 MIR3672-201ENST00000584290 82 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 KLKP1-201ENST00000595979 403 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 AL109918.3-201ENST00000603072 338 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 AL645944.1-201ENST00000603857 493 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 AC058791.1-201ENST00000608412 3198 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 ZNF826P-207ENST00000622273 1910 ntBASIC3.27□□□□□ -1.89
CCDC187A0A096LP49 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.135-201ENST00000363439 95 ntBASIC3.26□□□□□ -1.89
CCDC187A0A096LP49 Y_RNA.149-201ENST00000363558 117 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms