Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RAB9AP3-201ENST00000412737 573 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 RPS15AP10-201ENST00000432472 382 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 CST9LP2-201ENST00000437612 320 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 CYCSP32-201ENST00000440548 321 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 HMGN2P10-201ENST00000448085 265 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 RAB9AP1-201ENST00000449393 573 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 ELOCP24-201ENST00000456370 334 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AC006026.2-201ENST00000457376 180 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 RNU6-1170P-201ENST00000515974 106 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 SNORA31.1-201ENST00000515993 133 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 SNORA31.5-201ENST00000516190 133 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 Y_RNA.708-201ENST00000516950 96 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AP004607.1-201ENST00000524456 203 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 TRAV32-201ENST00000553993 340 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 CPDP1-201ENST00000579660 283 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AL451007.1-201ENST00000595491 289 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AC024153.1-201ENST00000603103 365 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 MTND4LP5-201ENST00000605152 292 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AP000654.2-201ENST00000605633 586 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AC019193.3-201ENST00000609144 554 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AL133215.3-201ENST00000609801 448 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AC244517.12-201ENST00000623581 663 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AC012442.3-202ENST00000636742 206 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 AC110491.1-201ENST00000562191 2010 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 KPNA2P1-201ENST00000458289 1591 ntBASIC3.46□□□□□ -1.85
PCDHA3Q9Y5H8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.46□□□□□ -1.85
PCDHA3Q9Y5H8 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.46□□□□□ -1.85
PCDHA3Q9Y5H8 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.46□□□□□ -1.85
PCDHA3Q9Y5H8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 RNU1-70P-201ENST00000362618 164 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 Y_RNA.151-201ENST00000363566 112 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-827P-201ENST00000365553 106 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-1227P-201ENST00000383981 107 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 MIR1302-11-201ENST00000408051 138 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 MIR1302-9-201ENST00000408365 138 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 MIR1302-10-201ENST00000408734 138 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-1050P-201ENST00000410388 107 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 AL354751.2-201ENST00000415471 210 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 RPL21P23-201ENST00000446654 460 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 AL031274.1-201ENST00000450334 232 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 PCMTD1P1-201ENST00000455560 355 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 Y_RNA.653-201ENST00000459091 95 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-377P-201ENST00000515965 102 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 IGHV3-76-201ENST00000522465 295 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 AP000867.2-201ENST00000532468 320 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 CYP2C61P-201ENST00000604072 290 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 AL121917.1-203ENST00000605534 577 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 AL627309.6-201ENST00000606857 840 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 MIR1302-2-201ENST00000607096 138 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 SNORA50A-202ENST00000629536 136 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 AL021368.2-201ENST00000606125 5352 ntBASIC3.46□□□□□ -1.86
PCDHA3Q9Y5H8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-78P-201ENST00000362897 107 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-942P-201ENST00000363002 107 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-198P-201ENST00000384258 104 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 MIR449B-201ENST00000384995 97 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 MIR517A-201ENST00000385001 87 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 Y_RNA.579-201ENST00000390939 94 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 SNORA75.4-201ENST00000391278 119 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 RNA5SP229-201ENST00000410809 99 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 AC097713.2-201ENST00000430199 356 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 AC005534.2-201ENST00000431047 433 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 AC115115.1-201ENST00000449927 248 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 RNU7-23P-201ENST00000459465 62 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 AC005741.1-201ENST00000511094 432 ntBASIC3.45□□□□□ -1.86
PCDHA3Q9Y5H8 RNU6-1153P-201ENST00000516760 105 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms