Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RPS29P13-201ENST00000402041 169 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 RN7SKP156-201ENST00000410308 342 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 AC096664.2-201ENST00000411843 406 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 RAB9AP3-201ENST00000412737 573 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 MTND2P23-201ENST00000422990 651 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 MTND3P9-201ENST00000429526 346 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 AL714022.1-201ENST00000439897 151 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 AL035666.1-201ENST00000446195 348 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 HMGN2P10-201ENST00000448085 265 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 RAB9AP1-201ENST00000449393 573 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 U3.44-201ENST00000458938 192 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 RPS27P29-201ENST00000463110 252 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 FTH1P2-201ENST00000466086 412 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 AC128713.1-201ENST00000471495 306 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6-581P-201ENST00000516214 105 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6-612P-201ENST00000516909 102 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 RN7SKP295-201ENST00000517264 153 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 AC018889.1-201ENST00000605372 397 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 CDC27P3-201ENST00000635418 1910 ntBASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
R3HCC1Q9Y3T6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6-105P-201ENST00000363909 104 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 SNORA41-201ENST00000384675 132 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 MIR199A2-201ENST00000385289 110 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 RPL23AP50-201ENST00000434149 455 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 AC125238.1-201ENST00000448842 249 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 RPS4XP2-201ENST00000458402 793 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 U8.21-201ENST00000459536 136 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 RPS29P27-201ENST00000463711 170 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 AC133134.1-201ENST00000466800 359 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 AP005902.1-201ENST00000521358 186 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 CBX3P8-201ENST00000532412 525 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 AC021739.1-201ENST00000559631 174 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 RN7SL703P-201ENST00000578485 302 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 AC005899.2-201ENST00000584353 90 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 AC097372.5-201ENST00000623665 376 ntBASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
R3HCC1Q9Y3T6 AC110491.1-201ENST00000562191 2010 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 Y_RNA.126-201ENST00000363382 111 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 Y_RNA.148-201ENST00000363557 117 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 SNORA63C-201ENST00000364578 129 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6-738P-201ENST00000384531 106 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 FTH1P15-201ENST00000406984 280 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6ATAC-201ENST00000408749 126 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 AC011816.1-201ENST00000441346 546 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 AC022447.4-201ENST00000504053 364 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 RNA5SP208-201ENST00000516156 78 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6-327P-201ENST00000516270 127 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 NACAP3-201ENST00000552100 481 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 MIR4273-201ENST00000582824 84 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 AL158827.2-201ENST00000602494 330 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 MIR8076-201ENST00000611401 83 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 AL138880.2-201ENST00000616214 239 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 AL691447.3-201ENST00000635020 330 ntBASIC4.12□□□□□ -1.75
R3HCC1Q9Y3T6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 RNU6-490P-201ENST00000362985 107 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 Y_RNA.252-201ENST00000364556 101 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 RNA5SP252-201ENST00000391131 119 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 RNA5SP293-201ENST00000410527 113 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 AC023141.4-201ENST00000412031 328 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 AC017079.2-201ENST00000416102 485 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 AL591419.1-201ENST00000427423 339 ntBASIC4.11□□□□□ -1.75
R3HCC1Q9Y3T6 AL353997.1-201ENST00000432936 108 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms