Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 MTCYBP35-201ENST00000503630 1137 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 FAM206BP-201ENST00000510179 541 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 SNORA44.1-201ENST00000517031 108 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 AL158211.2-201ENST00000607282 395 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 AC092656.1-203ENST00000624134 423 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 MIR3529-201ENST00000637713 78 ntBASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
HDGFL3Q9Y3E1 HAUS6P2-201ENST00000433254 2404 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 MIR424-201ENST00000362227 98 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 RNU1-58P-201ENST00000362413 163 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-529P-201ENST00000363383 104 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 RNA5SP99-201ENST00000364020 114 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-487P-201ENST00000365430 104 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-203P-201ENST00000384038 104 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 MIR30A-201ENST00000385092 71 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AC138623.1-201ENST00000418060 216 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 MTCO3P46-201ENST00000425787 232 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 TXNL1P1-201ENST00000429528 554 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 MTND1P3-201ENST00000484956 952 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AC114801.2-201ENST00000503825 781 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 RNU1-92P-201ENST00000517017 135 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AP000907.2-201ENST00000530827 353 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AC022616.8-201ENST00000533569 253 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AC135279.1-201ENST00000543493 504 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AC023813.2-201ENST00000564321 469 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AC136618.2-201ENST00000575091 400 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AC012360.2-201ENST00000609349 391 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AL355472.4-201ENST00000610233 626 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AL365204.3-201ENST00000612448 685 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 AC091304.6-201ENST00000619761 202 ntBASIC1.23□□□□□ -2.21
HDGFL3Q9Y3E1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 MIR758-201ENST00000390227 88 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 FCF1P10-201ENST00000407590 479 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 RNU4-62P-201ENST00000410125 130 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-1025P-201ENST00000410629 104 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AC016831.2-201ENST00000417179 352 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 USP9YP18-201ENST00000425912 695 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AC108667.1-201ENST00000428618 249 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 VN1R108P-201ENST00000431580 830 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 MTCO3P5-201ENST00000433620 714 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 LARP1BP3-201ENST00000437229 869 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 MTCO2P20-201ENST00000437339 673 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 RPS29P23-201ENST00000458635 123 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 RN7SKP210-201ENST00000459176 261 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 TPT1P8-201ENST00000510120 555 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 MTND2P31-201ENST00000512602 616 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-914P-201ENST00000516749 109 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AP005660.1-201ENST00000522972 293 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 COPS8P3-201ENST00000526024 482 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AP003168.1-201ENST00000530091 307 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AC018630.3-201ENST00000542637 96 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AL157871.3-201ENST00000557231 293 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 MTND4LP25-201ENST00000570218 163 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 MIR1273C-201ENST00000578669 77 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AL606834.3-201ENST00000602615 496 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AL670379.6-201ENST00000603753 252 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AL670379.11-201ENST00000604059 253 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 CYP2C61P-201ENST00000604072 290 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AC008162.1-201ENST00000604718 254 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AL670379.1-201ENST00000604752 252 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AL670379.5-201ENST00000605253 252 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AL670379.12-201ENST00000605291 253 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AL670379.8-201ENST00000605353 252 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AL670379.7-201ENST00000605823 252 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 Z82243.1-201ENST00000609432 473 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AC006386.1-201ENST00000619436 415 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AP003476.1-201ENST00000623984 516 ntBASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.22□□□□□ -2.21
HDGFL3Q9Y3E1 RNU6-858P-201ENST00000362436 107 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 RNU1-62P-201ENST00000362599 164 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 RNU6-942P-201ENST00000363002 107 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 ERHP2-201ENST00000402323 299 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 VPS26BP1-201ENST00000417155 755 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 TIMM9P1-201ENST00000436122 256 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms