Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL078604.3-201ENST00000615580 211 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 AC245102.2-201ENST00000448956 180 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 SNORD124-201ENST00000459577 104 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 SNORD116-28-201ENST00000516123 91 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 RNU6-758P-201ENST00000516292 89 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 RNU7-40P-201ENST00000516397 64 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 ZNF705CP-201ENST00000530515 889 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 AC009268.1-201ENST00000561352 1203 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 AC002400.1-201ENST00000569310 726 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 SNORD39.3-201ENST00000584451 71 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 BNIP3P26-201ENST00000600827 554 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 AC073569.3-201ENST00000619055 682 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 uc_338.22-201ENST00000622722 187 ntBASIC0.59□□□□□ -2.32
SHANK2Q9UPX8 RNU6-543P-201ENST00000362576 108 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 SNORD33-201ENST00000362761 85 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 RNU1-124P-201ENST00000363861 145 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 RNU6-26P-201ENST00000383985 107 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 SNORA50A-201ENST00000384225 134 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 AL591034.2-201ENST00000402839 359 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 RNA5SP501-201ENST00000410990 112 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 NDUFS5P4-201ENST00000412983 318 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 AC009518.2-201ENST00000418056 731 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 RPS25P9-201ENST00000435591 252 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 SNRPEP7-201ENST00000438350 220 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 RPS26P55-201ENST00000471178 356 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 AC104692.1-201ENST00000472406 90 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 MIR4661-201ENST00000582720 75 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 AC091965.5-201ENST00000624785 342 ntBASIC0.58□□□□□ -2.32
SHANK2Q9UPX8 RNA5SP327-201ENST00000362494 101 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 MIR597-201ENST00000384968 97 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 RNU2-15P-201ENST00000410692 191 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 USP9YP26-201ENST00000421008 661 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 PNRC2P1-201ENST00000423940 420 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 USP9YP18-201ENST00000425912 695 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AC007919.1-201ENST00000429380 217 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 MTCO2P20-201ENST00000437339 673 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 MTCO1P44-201ENST00000441935 243 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 USP9YP17-201ENST00000444617 696 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AP006587.4-201ENST00000526053 529 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AC136932.1-201ENST00000574771 208 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AC069304.2-201ENST00000605154 435 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AC024060.1-201ENST00000607052 494 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AL022345.1-201ENST00000607292 135 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AP005229.2-201ENST00000609980 697 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 AC013470.4-201ENST00000619978 986 ntBASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SHANK2Q9UPX8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 Y_RNA.324-201ENST00000365165 102 ntBASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 MTCO1P56-201ENST00000401674 224 ntBASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 PGBD4P5-201ENST00000445958 426 ntBASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 AP001324.2-201ENST00000461163 319 ntBASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 RPL21P47-201ENST00000483696 477 ntBASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 ACA64.5-201ENST00000516207 127 ntBASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 AC136628.3-201ENST00000521868 290 ntBASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 AP003066.2-201ENST00000529375 555 ntBASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 AC012557.2-201ENST00000605919 418 ntBASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 AC092608.3-201ENST00000625017 386 ntBASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
SHANK2Q9UPX8 Y_RNA.142-201ENST00000363491 102 ntBASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 SNORA4.3-201ENST00000365564 137 ntBASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 AL109755.1-201ENST00000401791 649 ntBASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 AC010099.3-201ENST00000423896 409 ntBASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 CENPUP1-201ENST00000526649 1202 ntBASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 ELOCP5-201ENST00000604924 333 ntBASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 AC004492.1-201ENST00000607036 742 ntBASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 MIR8065-201ENST00000620577 100 ntBASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 MTND1P37-201ENST00000636562 264 ntBASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 Z75746.1-201ENST00000440243 2080 ntBASIC0.55□□□□□ -2.32
SHANK2Q9UPX8 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SHANK2Q9UPX8 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.54□□□□□ -2.32
SHANK2Q9UPX8 RNU6-741P-201ENST00000383889 107 ntBASIC0.54□□□□□ -2.32
SHANK2Q9UPX8 MIR506-201ENST00000384998 124 ntBASIC0.54□□□□□ -2.32
SHANK2Q9UPX8 MRPL35P1-201ENST00000404272 572 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms