Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MIR9-1-201ENST00000385198 89 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 RNU2-52P-201ENST00000410680 190 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 RPLP0P7-201ENST00000416050 667 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AL365400.1-201ENST00000431854 640 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AC244505.4-201ENST00000434905 287 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 MTND4LP16-201ENST00000440828 295 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 SSXP5-201ENST00000443473 287 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AC117503.1-201ENST00000472241 394 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 RPS15AP34-201ENST00000487776 387 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AC022493.1-201ENST00000492984 337 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 RPL30P5-201ENST00000494923 336 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 MTND3P25-201ENST00000509243 135 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 MTND3P22-201ENST00000510932 243 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AC104136.1-201ENST00000512969 394 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 SNORA19.2-201ENST00000516013 114 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 RNU6-273P-201ENST00000516937 96 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 RNU6-143P-201ENST00000516942 93 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 RNA5SP291-201ENST00000517222 105 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AC090136.1-201ENST00000520009 240 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AC105029.1-201ENST00000520250 669 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AL157871.3-201ENST00000557231 293 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 MIR4319-201ENST00000577285 85 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AC005498.1-201ENST00000592125 465 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AC136601.2-201ENST00000604356 474 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 uc_338.5-201ENST00000611839 155 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AC022140.2-201ENST00000623500 188 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 AL359697.1-201ENST00000624879 587 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 TPTEP1-208ENST00000636884 213 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.92□□□□□ -1.94
SIX4Q9UIU6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX4Q9UIU6 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AC073544.1-201ENST00000600110 1595 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX4Q9UIU6 CUL1P1-201ENST00000509510 2425 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 MTND4P29-201ENST00000503122 1372 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AC062016.1-201ENST00000355719 319 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 SNORD3E-201ENST00000362899 217 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 SNORA5B-201ENST00000363786 132 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.510-201ENST00000384511 114 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 MIR301A-201ENST00000385261 86 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SIX4Q9UIU6 EIF4E2P1-201ENST00000393781 255 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AL590004.2-201ENST00000404787 371 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AL139281.1-201ENST00000422120 335 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AL512844.2-201ENST00000433990 593 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AMD1P1-201ENST00000457220 922 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 PPP1R2P5-201ENST00000457256 603 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.91□□□□□ -1.94
SIX4Q9UIU6 SNORD109B-201ENST00000458961 67 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 SNORD109A-201ENST00000459128 67 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 RPL7P43-201ENST00000478876 753 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 RN7SL283P-201ENST00000489055 303 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX4Q9UIU6 RNU6-864P-201ENST00000516256 108 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 RN7SKP282-201ENST00000516824 299 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.91□□□□□ -1.94
SIX4Q9UIU6 MIR1273C-201ENST00000578669 77 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AL132765.2-201ENST00000610812 351 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 FAM157A-202ENST00000615155 405 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 RMST_7.1-201ENST00000621935 268 ntBASIC2.91□□□□□ -1.94
SIX4Q9UIU6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.91□□□□□ -1.94
SIX4Q9UIU6 AC093010.3-201ENST00000570269 15214 ntBASIC2.9□□□□□ -1.94
SIX4Q9UIU6 AL049641.1-201ENST00000441055 1948 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 Y_RNA.33-201ENST00000362591 102 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 RNU4-73P-201ENST00000363164 141 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 MT-TD-201ENST00000387419 68 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 RNU6-1025P-201ENST00000410629 104 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 NDUFA5P4-201ENST00000436704 385 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC139453.3-201ENST00000493276 369 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.9□□□□□ -1.95
SIX4Q9UIU6 SNORA14.1-201ENST00000516113 141 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
SIX4Q9UIU6 RNA5SP165-201ENST00000517142 115 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms