Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LRFN1Q9P244 MIR4425-201ENST00000580572 84 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 OR1M4P-201ENST00000589199 287 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.14□□□□□ -1.91
LRFN1Q9P244 AC025253.1-201ENST00000613623 543 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 FAM157A-202ENST00000615155 405 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LRFN1Q9P244 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.14□□□□□ -1.91
LRFN1Q9P244 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRFN1Q9P244 Y_RNA.72-201ENST00000362894 103 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 SNORD116-20-201ENST00000384529 92 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AL513475.1-201ENST00000406602 315 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC017079.2-201ENST00000416102 485 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AL117339.3-201ENST00000418733 162 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC002075.2-201ENST00000425207 252 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC093151.1-201ENST00000427711 313 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.13□□□□□ -1.91
LRFN1Q9P244 USP9YP8-201ENST00000441913 500 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.13□□□□□ -1.91
LRFN1Q9P244 SNRPEP8-201ENST00000442866 260 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.13□□□□□ -1.91
LRFN1Q9P244 AP001486.1-201ENST00000463339 476 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 RPL7P43-201ENST00000478876 753 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 HMGN1P12-201ENST00000499125 195 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC091951.2-201ENST00000500762 203 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC008549.1-201ENST00000512900 643 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.13□□□□□ -1.91
LRFN1Q9P244 AP005597.4-201ENST00000526762 229 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC026333.2-201ENST00000542164 106 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.13□□□□□ -1.91
LRFN1Q9P244 MIR4276-201ENST00000584832 70 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC011712.1-201ENST00000588959 234 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 LARP7P1-201ENST00000605576 316 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC009994.1-201ENST00000606889 253 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC138915.1-201ENST00000565427 1685 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
LRFN1Q9P244 AC068647.1-201ENST00000489539 2265 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 Z83843.1-201ENST00000604070 3685 ntBASIC3.13□□□□□ -1.91
LRFN1Q9P244 MTND4P12-201ENST00000498999 1377 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.12□□□□□ -1.91
LRFN1Q9P244 AC138393.1-203ENST00000327086 343 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 Y_RNA.279-201ENST00000364763 95 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 Y_RNA.414-201ENST00000384011 101 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 AL391417.1-201ENST00000404100 426 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 AC098614.3-201ENST00000438957 440 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 AL359672.1-201ENST00000442302 409 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.12□□□□□ -1.91
LRFN1Q9P244 PMCHL2-203ENST00000457791 237 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 AP001324.2-201ENST00000461163 319 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.12□□□□□ -1.91
LRFN1Q9P244 AC010486.1-201ENST00000511793 424 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 AC046134.1-201ENST00000514454 666 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 RNU6-875P-201ENST00000516488 106 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.12□□□□□ -1.91
LRFN1Q9P244 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.12□□□□□ -1.91
LRFN1Q9P244 UBE2V2P2-201ENST00000587677 504 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRFN1Q9P244 AC063943.3-201ENST00000615562 356 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 MIR8057-201ENST00000620957 69 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 AL136221.1-201ENST00000621449 509 ntBASIC3.12□□□□□ -1.91
LRFN1Q9P244 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.12□□□□□ -1.91
LRFN1Q9P244 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRFN1Q9P244 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRFN1Q9P244 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN1Q9P244 AL109809.4-201ENST00000603520 2185 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN1Q9P244 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN1Q9P244 CBX3P1-201ENST00000325243 554 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 RNU6-283P-201ENST00000364788 107 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 SNORA32.2-201ENST00000384049 122 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 RNU6-510P-201ENST00000391239 108 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN1Q9P244 AC074117.2-201ENST00000417130 397 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 AC009296.1-201ENST00000443146 155 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 AL357552.1-201ENST00000445254 415 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 AC006539.3-201ENST00000454258 129 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.11□□□□□ -1.91
LRFN1Q9P244 RNU6-377P-201ENST00000515965 102 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 SNORA31.23-201ENST00000517219 133 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.11□□□□□ -1.91
LRFN1Q9P244 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN1Q9P244 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN1Q9P244 VN1R107P-201ENST00000601784 209 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 AC021646.1-201ENST00000605469 484 ntBASIC3.11□□□□□ -1.91
LRFN1Q9P244 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
LRFN1Q9P244 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN1Q9P244 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN1Q9P244 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
LRFN1Q9P244 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRFN1Q9P244 RBBP8P1-201ENST00000449447 1844 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 AC010329.5-201ENST00000623497 2174 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LRFN1Q9P244 RNU6-105P-201ENST00000363909 104 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 RNU6-128P-201ENST00000383976 107 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 MIR450B-201ENST00000401182 78 ntBASIC3.1□□□□□ -1.91
LRFN1Q9P244 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.1□□□□□ -1.91
LRFN1Q9P244 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms