Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 RPL30P11-203ENST00000598995 310 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 AC093788.1-201ENST00000609356 927 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 AL359547.2-201ENST00000615810 418 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 DUXAP9-208ENST00000622815 614 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 MIR219B-201ENST00000637023 88 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 AC007671.2-201ENST00000637344 619 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 MIR3529-201ENST00000637713 78 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC073343.1-201ENST00000328239 651 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 RNU6-942P-201ENST00000363002 107 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 RNU6-843P-201ENST00000384454 104 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 MIR764-201ENST00000390811 85 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 HIGD1AP15-201ENST00000416198 280 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AL593851.1-201ENST00000426171 157 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AL627311.1-201ENST00000431514 115 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 MTND6P13-201ENST00000443510 523 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 NDUFB1P2-201ENST00000449477 176 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 KATNBL1P6-201ENST00000453433 915 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 MTND2P14-201ENST00000482139 351 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 MTAPP1-201ENST00000489154 819 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 RNU6-237P-201ENST00000515985 71 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 HSPE1P18-201ENST00000517602 280 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AP003461.1-201ENST00000528866 78 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 ELOCP32-201ENST00000548625 324 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 BNIP3P30-201ENST00000601184 574 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC022022.2-201ENST00000602989 360 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC073410.2-201ENST00000603240 332 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC025754.2-201ENST00000606491 432 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC098614.4-201ENST00000607601 462 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC104010.1-201ENST00000616889 150 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 AC023510.2-201ENST00000622162 746 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 HAUS6P2-201ENST00000433254 2404 ntBASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KLHL28Q9NXS3 SNORD56.2-201ENST00000363242 71 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 RNU6-501P-201ENST00000364072 100 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 RNU6-487P-201ENST00000365430 104 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 MIR186-201ENST00000384988 86 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 AC138623.1-201ENST00000418060 216 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 snoU13.23-201ENST00000458863 104 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 RPL38P4-201ENST00000502376 214 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 AC108210.2-201ENST00000503681 201 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 NDUFA5P6-201ENST00000542110 379 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 PCMTD1P2-201ENST00000565017 355 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 DEFB122-202ENST00000569013 197 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 MTATP6P24-201ENST00000576835 677 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 AC026271.5-201ENST00000577873 130 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 MIR4448-201ENST00000584360 86 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 AC008751.2-201ENST00000597885 980 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 AC021646.1-201ENST00000605469 484 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 AC126118.1-201ENST00000607744 628 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 AC241585.2-209ENST00000638217 143 ntBASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.87□□□□□ -2.11
KLHL28Q9NXS3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC103710.2-202ENST00000641454 2853 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 SNORD3E-201ENST00000362899 217 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 RNU4-1-201ENST00000363925 141 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 RNU6-72P-201ENST00000384285 79 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 SNORA40.19-201ENST00000390846 128 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 RNA5SP450-201ENST00000411206 102 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC010099.3-201ENST00000423896 409 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC137499.1-201ENST00000427602 88 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC027124.2-201ENST00000428249 105 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 USP9YP8-201ENST00000441913 500 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 MTCO2P29-201ENST00000465212 189 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 HMGB1P30-201ENST00000492455 606 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 MTCYBP35-201ENST00000503630 1137 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC112206.3-201ENST00000514578 389 ntBASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.86□□□□□ -2.11
KLHL28Q9NXS3 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms